ZBIT Bioinformatics Toolbox

ZBIT Bioinformatics Toolbox
Deployment:: ZBIT Bioinformatics Toolbox Domain:: Bioinformatics: SBML tools, expression data analysis, transcription factor analysis Owners:: Center for Bioinformatics Tuebingen (ZBIT). Audience:: Experimental biologists User Base:: Server Topology:: SGE Cluster Compute:: Memory:: Storage:: NFS Disk Size:: User Management:: Public access

This customized version of the Galaxy webservice framework was set up to allow the public access of our bioinformatics tools. These tools were developed and implemented by members of the Department of Cognitive Systems at the University of Tübingen.

Domain

Bioinformatics: SBML tools, expression data analysis, transcription factor analysis

Community

Researchers with interest in SBML models,

Compute Infrastructure

This sections describes the compute architecture of your deployment.

Compute

Small SGE cluster consisting of 3 execution hosts

Storage

NFS file server

Network

Gigabit Ethernet

User Management

Default user management

Customizations

  • modified webinterface
  • support for additional custom datatypes
  • enhanced data_column parameter