miCloud

Container:
Scope:
Summary:Leverage cloud technologies to provide an easy-to-use streamlined NGS data analysis using local computational hardware

Comments

  • Includes three preconfigured and ready-to-execute NGS pipelines: two for single or paired-end ChIP-Seq data and one for paired-end RNA-Seq data
  • miCloud can also provide access to a large selection of ready-to-execute bioinformatics pipelines, available from online Docker repositories such as BioContainers, DockStore, or BioShadock
  • Provides a workflow-centric interface to a Galaxy engine, using BioBlend.

User Support

    Quotas

    • None.

    Citations

    Sponsors

    • Weill Cornell Medicine and Department of Biological Sciences, Hunter College of the City University of New York