RNAcommender

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Scope:
Summary:RNAcommender is a tool for genome-wide recommendation of RNA-protein interactions. It is a recommender system capable of suggesting RNA targets to unexplored RNA binding proteins, by propagating the available interaction information, taking into account the protein domain composition and the RNA predicted secondary structure.

Comments

  • Available in Docker and in the Galaxy Toolshed.

User Support

    Quotas

    • None

    Citations

    Sponsors

    • DISI - Department of Information Engineering and Computer Science, University of Trento, Italy