Galaxy is an open-source platform for FAIR data analysis that enables users to:

  • use tools from various domains (that can be plugged into workflows) through its graphical web interface.
  • run code in interactive environments (RStudio, Jupyter...) along with other tools or workflows.
  • manage data by sharing and publishing results, workflows, and visualizations.
  • ensure reproducibility by capturing the necessary information to repeat and understand data analyses.

The Galaxy Community is actively involved in helping the ecosystem improve and sharing scientific discoveries.

GCC2024

The European Galaxy server

The European Galaxy server UseGalaxy.eu is maintained primarily by the Freiburg Galaxy Team in collaboration with other academic groups across Europe and with the US Galaxy team. Please check our Terms of Service and data retention police before using the server. We offer thousands of tools, increased quota on temporary basis, and compute infrastructure for trainers through Training Infrastructure as a Service (TIaaS).

Projects

The European Galaxy community participates in several projects at the European, national and regional levels.

Communities

To address the needs of scientific & local communities, we offer customized Galaxy frontpages.

Citation

Have you used the European Galaxy server for your data analysis?



Team

The European Galaxy team is distributed across different countries in Europe.



News

Transcriptomic Data Analysis Using the Galaxy Platform

An interesting book chapter presents an overview of a transcriptomics data analysis pipeline using Galaxy, specifically designed for studying gene expression in coffee flowers. This pipeline can be leveraged in genetic improvement programs, for instance, to combat climate change

How to improve the annotation of Galaxy resources? Outcomes of an online hackathon for improving the annotation of Galaxy resources for microbial data resources

Find out how we improved the annotation of Galaxy tools and training material for microbiological data analysis!

Poster highlight: Implementation of a reproducible pipeline for producing seasonal Arctic sea ice forecasts (Stoeckl et al. 2023)

We are thrilled to highlight the poster presentation by Vanessa Stoeckl at the European Geoscience Union (EGU) Conference 2024. "

Whisper: An open-source model for speech recognition now available in Galaxy!

Now use Whisper in the European Galaxy Server to recognize and transcribe your speech data🎙️!

pairtools: A simple and fast tool suite for processing sequencing data from a Hi-C experiment now in Galaxy!

Now use pairtools in the European Galaxy Server to process your Hi-C experiment data 🧑‍💻

Events

May 7 - May 11Biology of Genomes

The 2024 meeting will address DNA sequence variation and its role in molecular evolution, population genetics, complex diseases, comparative genomics, large-scale studies of gene and protein expression, and genomic approaches to ecological systems.

May 14 - May 15de.NBI: Galaxy Microbial Genomics Course - 2024

This course will provide an overview of the field of genomics and how to use the Galaxy platform for genome analysis, with the main focus on the assembly and annotation of bacterial genomes.

May 14 - May 23RDA 22nd Plenary Meeting – Fully Virtual

The Research Data Alliance (RDA) Plenary Meeting will focus on collaboration and engagement with their global community through the sharing of local experiences, best practices and recommendations. The European Galaxy project is invited to talk about Research Data Management in Galaxy and to give an overview of Galaxy features that serve different parts of the data life cycle.

Jun 10 - Jun 11ELIXIR All Hands 2024

The 10th ELIXIR All Hands meeting brings together members of the ELIXIR community from across the ELIXIR Nodes, and collaborators from partner organisations. Galaxy will be presented by different nodes.