Galaxy Event Horizon

A community contribution day

We'll be teaching w/ our new Galaxy graphical interface - join us and learn to use QIIME 2 through a GUI! Register by January 7.

Volunteer to lead the discussion

Volunteer to lead the discussion

Workshop on high-throughput data analysis. This is an online course and is limited to the members CRC 1425, CRC 992 and MeInBio.

Applications close 31 December

microGalaxy is a community focusing on microbial analysis with Galaxy

The ins and outs of setting up your own production quality Galaxy server.

Get a taste of all the GTN has to offer!

Microbiome analysis going from samples, to sequencing, to numerical ecology analysis

This course will give a general introduction on the galaxy web-page structure, how to import data, run tools, and share analyses. Participants will run a whole NGS analysis using an RNA-seq dataset as an example.

Applications close 18 February

Applications close 8 March

The annual gathering of the Galaxy Community

Galaxy in AnVIL for structural variants.

Register by December 15

This workshop will demonstrate tools available via BioCompute Portal and how they enable interoperability in research and regulatory spaces.

Galaxy is for Plants and Animals too...

A free 4-day virtual workshop

Using Galaxy and the command line. Register by 29 November.

Using Galaxy and the command line. Register by 25 November.

Galaxy on the Cloud

...upload viral sequencing data, call all variants, create a variety of reports and create consensus alignments...

A 3-day training course on bioinformatics methods for de novo assembly and structural and functional annotation of genomes using short (Illumina) and long reads (PacBio / Oxford Nanopore) sequencing technologies (will be run in french).

Assessing quality and filtering of FASTQ format data. Register by 22 November.

Learn to work with NGS data of 16S, 18S, ITS … DNA using our Galaxy instance and the FROGS pipeline.

Curso de análisis de células únicas usando Galaxy en español.

Recent developments and future plans in the Galaxy Metabolomics community, including a summary of the metaRbolomics Hackathon.

Learn Galaxy via two hands-on tutorials on how to use the service to rapidly and reproducibly analyse your data.

A community contribution day

Microbiome experts and instructors from Galaxy community will teach online courses on microbiome analysis via interactive resources.

Join the discsussion (Slides: 21.09 Release Testing)

NGS data analysis harnessing the power of Galaxy

2 days of talks and hands-on learning

Advance the development of an open-source infrastructure for data integration

Open to everybody interested in Genome Annotation or Galaxy

We’ll meet online over three afternoons to share achievements, challenges and future directions.

The role of aerosols and clouds in Earth’s climate system along with observational techniques, Earth system models, climate forcing and climate model evaluation through a series of lectures and tutorials.

Course is full

Join the discussion. (Video, Slides)

Discover and apply tools for scRNA-Seq analysis

Gallantries Project: Delivering Galaxy hybrid events, and evolving with the pandemic

Talk showcasing the image analysis capabilities of Galaxy.

A community contribution day

Organised by the Galaxy Proteomics communities in the US, Australia and Europe.

Savoir utiliser l'environnement Galaxy

GA is planning on hosting both regional and global conferences to bring Galaxy practitioners from all around the globe to learn from our journey and inform the path forward.

Using Galaxy and the Workflow4metabolomics infrastructure to analyse your own metabolomics data. Preregister by 15 May.

Create and assess genome assemblies from Illumina and Nanopore reads. Applications due 29 September.

from data preparation to statistical testing, visualization and functional analysis

The latest version of VGP's pipeline has been ported to Galaxy. (Video)

microGalaxy is a new community focusing on microbial analysis with Galaxy

(Video, Poster)

A community contribution day

Part of Cycle "Bioinformatique par la pratique" 2021

Get a hands-on introduction to Galaxy, an online platform for data analysis. Applications close at 5pm AEST Tuesday 31 August.

Recent developments and future plans in the Galaxy Metabolomics community

Part of Cycle "Bioinformatique par la pratique" 2021

Build use and support ARCs with new tools, templates, and ideas.

Jetstream, AWS, GCP, and UseGalaxy.org (Video, Slides)

...upload viral sequencing data, call all variants, create a variety of reports and create consensus alignments...

...upload viral sequencing data, call all variants, create a variety of reports and create consensus alignments...

Hands-on practical workshop: an introduction to next generation sequencing technologies and how they work, providers, common bioinformatics workflows, standardised file types, quality control and an introduction to Galaxy Australia.

How can we make the tool panel more tractable? (Video)

Open, reliable, and transparent ecology research with Galaxy-E

2 million jobs since 2019 and 13,000+ users

Le module Galaxy vise à présenter l’environnement Galaxy, convivial d’utilisation pour celles et ceux qui seraient réfractaires à la programmation sous UNIX et R, et à vous accompagner dans sa prise en main.

Galaxy's annual community gathering

The GenAP team invites you to a free webinar

An Exposome toolbox for Galaxy is being developed to ease analysis of high-resolution mass spectrometry (HRMS) datasets

NGS data analysis harnessing the power of Galaxy

L’équipe du projet GenAP vous propose un webinaire gratuit

GCC Cofest prep is pre-empting the June Papercuts day

Showcasing the image analysis capabilities of Galaxy.

Environments for Galaxy Development (Video)

Analyze your own data in VectorBase (Register)

Register by 14 April (Video)

Latest developments and plans, and discussion of current and future collaborations within ELIXIR. (Slides)

今回は、完全オンラインミートアップのため、全世界同時開催です。

Galaxy Admin Training (GAT) curriculum and materials CollaborationFest.

Sponsored by BioClues, TMS Foundation and Galaxy India (Google Meet)

Gathering the Dutch Galaxy Community

Full. Part of Cycle "Bioinformatique par la pratique" 2021

What's changed recently, and what's involved (Video, Slides)

Hands on workshop on variant calling and visualisation of variants for bacterial organisms. Apply by 12 May. (Apply)

Full. Part of Cycle "Bioinformatique par la pratique" 2021

Step through viral variant calling using tools in the Galaxy Australia web platform. Apply by 12 May. (Apply)

Part of the Galaxy Resources Webinar Series (Slides, Video)

Hands on guidance on performing variant calling in polyploid organisms including humans, plants and animals. Apply by 12 May. (Apply)

Full. Theoretical and practical aspects of using next generation sequencing (NGS) data for analyzing repeat composition of plant genomes. (Register)

Introduction to basic concepts and tools from the ASaiM-MT workflow.

Connect with the Galaxy Training Community!

A community contribution day

Giving new users some obvious guidance when they first arrive. (Video, Slides)

Part of the Galaxy Resources Webinar Series (Video, Ecosystem slides, Docker slides, Server slides)

Hands-on practical introduction to next generation sequencing technologies. No prior experience of using Galaxy is required. (Register)

Hands-on: MS-based multi-omics informatics tools, using the investigation of COVID19 proteomics data as a case study.

Plus recent developments and future plans in the Galaxy Metabolomics community

Savoir utiliser l'environnement Galaxy

(Slides, Video)

Part of the Galaxy Resources Webinar Series (Video, Slides 1, Slides 2)

FULL. A general introduction on Galaxy, how to import data, run tools, and share analyses. Participants will run a whole NGS analysis using an ATAC-seq dataset as an example.

Apply by 26 February.

Part of Tools for Applied Data Science Using Cloud-Based Platform - Module 7 (Video)

immuneML is a platform for the analysis of adaptive immune receptors through machine learning. (Video)

An introduction to RNA-seq analysis using the Galaxy Australia web platform (Register)

Part of the Galaxy Resources Webinar Series (Slides, Video)

NGS data analysis harnessing the power of Galaxy

...with a special focus on bulk and single-cell RNA-Seq data analysis...

a high level overview of the Galaxy Project - what it is, what it does and how to start using it. And the Elixir Galaxy and currently forming Galaxy Czech communities (Slides)

A community contribution day

Online course by ELIXIR Norway

Next generation sequencing for RNA-Seq and Epigenetics

今回は、完全オンラインミートアップのため、全世界同時開催です。

end-to-end analysis of common MTI assays

Ecostat 2021: Réunion annuelle du GDR Ecologie Statistique

Online course by ELIXIR Norway

(Video)

Full. Part of Cycle "Bioinformatique par la pratique" 2021

We meet every 6 weeks

from data preparation to statistical testing, visualization and functional analysis

3 platforms for the rapid and open sharing of Covid-19-related biomedical data: The European Covid-19 Data Platform, Galaxy and Workflowhub.eu. Free. (Video)

Cool stuff like using your own reference genome, restarting tools & workflows, visualizations, ... (Video, Slides)

(Video)

Learn how to identify structural variants in genomes using Galaxy

Online course by ELIXIR Norway

Limited to 50 participants

Progress towards executing GPU applications in Galaxy (Video)

A community contribution day

Jupyter Notebooks and RStudio in combination with Galaxy workflows (Video, Slides)

Full. Part of Cycle "Bioinformatique par la pratique" 2021

Applications close 22 January

Recent developments and future plans in the Galaxy Metabolomics community

Integrating open data and Galaxy workflows into plant breeding and research strategy at KWS

Galaxy collections and advanced collections features (Register)

What's changed recently, and what's involved (Slides, Video)

Practical applications of the FAIR data principles, particularly in the context of clinical bioinformatics (Video, Slides)

Statistical design and analysis of quantitative shotgun proteomic experiments with tandem mass tag (TMT) labeling

From parameter sweeping to automatic reports (Slides, Video)

Make your gateway sustainable; register by February 24

今回は、完全オンラインミートアップのため、全世界同時開催です。

Connect with the Galaxy Training Community!

A community contribution day

Open Data Infrastructures to tackle COVID-19 pandemic (Slides, Video)

An introduction to RNA-seq analysis using the Galaxy Australia web platform. Apply by 5 February.

Security, security, security. (Video)

We meet every 6 weeks

Open Data Infrastructures to tackle COVID-19 pandemic (Variant Workflows Slides, Viral Beacons Slides, Video)

Part of Cycle "Bioinformatique par la pratique" 2021

Full. Part of Cycle "Bioinformatique par la pratique" 2021

Get a taste of all the GTN has to offer!

Open Data Infrastructures to tackle COVID-19 pandemic (Video)

(Video)

How to grow the Galaxy Developer community? Admin Training Update (Slides, Video)

Open Data Infrastructures to tackle COVID-19 pandemic (Slides, Video)

A GeneSpectrum training offering

今回は、完全オンラインミートアップのため、全世界同時開催です。

Recent developments and future plans in the Galaxy Metabolomics community

Open Data Infrastructures to tackle COVID-19 pandemic (Slides, Video)

A GalaxyPro Webinar (Video)

The ins and outs of setting up your own production quality Galaxy server.

(Video)

A community contribution day

Open Data Infrastructures to tackle COVID-19 pandemic (Slides, Video)