What will you learn?

This course will introduce the Galaxy Platform, covering the basic functionality for single-cell data processing. It will include an overview of various common single-cell datatypes used in bioinformatics. Participants will gain hands-on experience loading single-cell data from external resources into Galaxy, parsing academic literature to find relevant metadata, and converting the data into the common AnnData format, ready for further analysis in Galaxy.

Who is this for?

• Researchers who want to reuse public single-cell data
• Researchers with little to no programming background who would want to use an interface instead of a programming environment

Course prerequisites

Participants are encouraged to familiarise themselves with the Galaxy platform and the available training materials.

• A short introduction to Galaxy
• An introduction to scRNA-seq data analysis

Questions and contact

Should you have any questions, please contact us at contact@elixiruknode.org

Registration

Register now at FAIR data management in single-cell analysis.

Funding

This course is funded as part of the UKRI Innovation Scholars. Data Science Training in Health and Bioscience Call (DaSH). (MR/V038966/1)