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Oct 5, 2012 Distribution & News Brief

Complete News Brief

tool shed
**Highlights:** * **[BWA](http://bio-bwa.sourceforge.net/)** tool wrappers *[migrated](/src/archive/dev-news-briefs/2012-10-05/index.md#bwa-migration-to-tool-shed)* to the **[Galaxy Main Tool Shed](http://toolshed.g2.bx.psu.edu/)**. * **Tool Factory** paper has been [E Published](/src/archive/dev-news-briefs/2012-10-05/index.md#galaxy-tool-factory-paper-e-published) in [PubMed](http://www.ncbi.nlm.nih.gov/pubmed) at **[PMID: 23024011](http://www.ncbi.nlm.nih.gov/pubmed/23024011)**. * The **[Tool Shed Wiki](/src/toolshed/index.md)** wiki has been re-written with a new, cleaner presentation. And check out all the [new features](/src/archive/dev-news-briefs/2012-10-05/index.md#tool-shed)! * Accessible **tool versions** in the UI and **new exit code features** enable *[clearer experimental tracking and ease reproducibility](/src/archive/dev-news-briefs/2012-10-05/index.md#tools)*. * Release also includes **[Visualization](/src/archive/dev-news-briefs/2012-10-05/index.md#visualization-framework)** updates, a new admin tool for *[PostgreSQL](http://www.postgresql.org)* **[Dataset cleanup](/src/archive/dev-news-briefs/2012-10-05/index.md#dataset-cleanup)**, and improvements in **[API](/src/archive/dev-news-briefs/2012-10-05/index.md#ap)** , **[Workflow](/src/archive/dev-news-briefs/2012-10-05/index.md#workflows)**, and **[Security](/src/archive/dev-news-briefs/2012-10-05/index.md#security-fixes)** components.

http://getgalaxy.org

http://bitbucket.org/galaxy/galaxy-dist

new:     $ hg clone http://www.bx.psu.edu/hg/galaxy galaxy-dist
upgrade: $ hg pull -u -r b5bda7a5c345

Thanks for using Galaxy!

Jennifer Jackson & the Galaxy Team