RNA Modification Calling

Container:
Scope:
Summary:Galaxy Docker image for RNA analysis and modification calling

Comments

  • Versatile user-friendly graphical workflow system for modification calling based on machine learning.
  • The workflow commences with a principal module for trimming, mapping, and postprocessing.
  • Postprocessign includes a quantification of mismatch and arrest rates with single-nucleotide resolution across the mapped transcriptome.
  • Further downstream modules include tools for visualization, machine learning, and modification calling.

User Support

Quotas

  • None.

Citations

Sponsors

  • Helm Group, Institute of Pharmacy and Biochemistry, Johannes Gutenberg-University, Mainz, Germany