Erasmus MC Galaxy Event Archive

Old events relevant to the Erasmus MC Galaxy community.

DateTopic/EventVenue/LocationContact
12 June 2023Gallantries & ELIXIR-GOBLET Train the Trainers

This course introduces trainers to learning principles, training techniques, lesson, session, course, and material design as well as assessment and feedback. This course is has been developed for by trainers in the bioinformatics but is suitable for all trainers and educators in higher education.

Online, GlobalTraining offered by GTN Member Bérénice Batut
25 May 2023Galaxy Metabolomics Community Call

A forum to share updates and discuss community-wide topics.

Galaxy Metabolomics Community Call, Online foellmelanie@gmail.com; helge.hecht@recetox.muni.cz
25 May 2023Galaxy Community Call: Galaxy Total Perspective Vortex

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Nuwan Goonasekera
16 May 2023Galaxy training: Fair-Ease feat EuroScienceGateway

FAIR-EASE and EuroScienceGateway join forces

Lille (France)Training offered by GTN Member Marie Josse
16 May 2023Small Scale Galaxy Admins Meeting

Online, Global Lucille Delisle
4 May 2023Galaxy Community Call: King of the Quarries: Investigating the origins of quarry populations of the Caribbean king crab (Maguimithrax spinosissimus) to advise coral reef recovery in the Florida Keys

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Natalie Whitaker
4 May 2023

microGalaxy is a communities of practice focusing on microbial data analysis with Galaxy

Online, Global Bérénice Batut
13 April 2023Galaxy Community Call: Using Galaxy to assemble dozens of high-quality vertebrate reference genomes

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Linelle Abueg
30 March 2023Galaxy Metabolomics Community Call

A forum to share updates and discuss community-wide topics.

Galaxy Metabolomics Community Call, Online foellmelanie@gmail.com; helge.hecht@recetox.muni.cz
21 March 2023Small Scale Galaxy Admins Meeting

Online, Global Lucille Delisle
16 March 2023Galaxy Community Call: Collections and assembly pipelines

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Bérénice Batut
2 March 2023Galaxy Community Call: 2023 Galaxy Roadmap

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Galaxy PIs
20 February 2023Workshop on High-Throughput Data Analysis with Galaxy

This course introduces scientists to the data analysis platform Galaxy. The course is a beginner course; there is no requirement of any programming skills.

University of Freiburg, GermanyTraining offered by GTN Member Anika Erxleben
9 February 2023Galaxy Community Call: 23.0 Release Testing Outcomes

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Release Testing Team
9 February 2023

microGalaxy is a communities of practice focusing on microbial analysis with Galaxy

Online, Freiburg, Germany Bérénice Batut
6 February 2023

Participants will be guided through the droplet-based scRNA-seq analysis pipelines from raw reads to trajectories.

Online, EMBL-EBI, Hinxton, United Kingdom Jane Reynolds
2 February 2023A practical workshop for (foodborne) pathogen detection from (direct Nanopore) sequencing data using Galaxy

The purpose of this workshop is to gain knowledge on detect (foodborne) pathogens from (direct Nanopore) sequencing data using Galaxy. The workshop will be on February 2nd 2023 as a 1-day hybrid (F2F at FHNW Muttenz, Switzerland and online), free and practical workshop.

FHNW University of Applied Sciences and Arts Northwestern Switzerland, Muttenz, SwitzerlandTraining offered by GTN Member Bérénice Batut
19 January 2023Galaxy Community Call: The Genomic Data Science Community Network

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Natalie Kucher
17 January 2023

Assemble and analyze a reference-quality genome in Galaxy

Plant and Animal Genomes 30, San Diego, California, United States Michael C. Schatz, Delphine Larivière, Alex Ostrovsky
17 January 2023Small Scale Galaxy Admins Meeting

Online, Global Hans-Rudolf Hotz
8 December 2022Galaxy Community Call: UseGalaxy Historic Usage Dashboard

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Enis Afgan
17 November 2022Galaxy Community Call: The new GTN course builder

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Helena Rasche & Saskia Hiltemann
7 November 2022Galaxy @ BioHackathon-Europe 2022

BioHackathon activities are driven by practical sessions where people gather, discuss, and implement ideas and projects during intensive and productive coding sessions

Paris + Online, France Project organizers
31 October 2022Analysis of biological data with Galaxy

Learn how to use Galaxy in YOUR research

Penn State University Park Campus, Wartik Building, Room 501 Greg Von Kuster and Anton Nekrutenko
27 October 2022Galaxy Community Call: Galaxy Release Process: Overview and Coming Changes

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Dannon Baker
14 October 2022

Image analysis using Galaxy

Beatriz Serrano-Solano, Björn Grüning
13 October 2022Galaxy Community Call: Muon Science community

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Eli Chadwick
3 October 2022

online Melanie Foell
3 October 2022European Galaxy Days (EGD)

European Galaxy Community meeting in Autumn

Freiburg, Germany Hans-Rudolf Hotz, Björn Grüning, Beatriz Serrano-Solano, Oana Marchis, Anika Erxleben
3 October 2022

Online video tutorials about the use of cloud computing resources for MS-based proteomics.

Online Melanie Foell
29 September 2022Galaxy Community Call: Workflows, Planemo, BioBlend and tags to automate SARS-CoV-2 genome surveillance

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Wolfgang Maier
15 September 2022Galaxy Community Call: Tool Search “Past, Present, and Future”

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Michelle Savage, Ahmed Awan, Tyler Collins
1 September 2022CANCELLED: Galaxy Community Call: Galaxy Release Process: Overview and Coming Changes

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Dannon Baker
18 August 2022Galaxy Community Call: Outcomes of the Outreachy projects

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Outreachy mentors & interns
4 August 2022Galaxy Community Call: Machine Learning Toolkit in Galaxy

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Kaivan Kamali
25 July 2022

This course will introduce you to SARS-CoV-2 bioinformatics pipelines. Learn how to use the web-based tool Galaxy for bioinformatics analyses, including how to input and process data, build a pipeline, and use existing workflows.

Online, Mexico, South Africa, Sydney, UK, India Carolina Castañeda Garcia, Claudine Nkera-Gutabara, Tanya Golubchik, Tracey Calvert-Joshua, Varun Shamanna
16 July 2022

The annual gathering of the Galaxy Community

University of Minnesota, Minneapolis, Minnesota, United StatesTraining offered by GTN Member Organizers
7 July 2022Galaxy Community Call: JupyterLab interactive tool

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Anup Kumar
5 July 2022

KU Leuven, Belgium Kaivan Kamali, Nate Coraor, Marius van den Beek, John Chilton, Anton Nekrutenko
5 July 2022

iRODS 2022 User Group Meeting

KU Leuven, Belgium Kaivan Kamali, Nate Coraor, Marius van den Beek, John Chilton, Anton Nekrutenko
23 June 2022Galaxy Community Call: Release 22.05

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global John Davis, Marius van den Beek
13 June 2022

Applications close 8 March

EMBL-EBI, Online, Hinxton, United Kingdom Organizers
9 June 2022Galaxy Community Call: Automatic updates of Galaxy tools and workflows

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Simon Bray
9 June 2022

Talk at the ELIXIR All Hands 2022

ELIXIR All Hands 2022, Amsterdam, Europe Beatriz Serrano-Solano
9 June 2022

Workshop at the ELIXIR All Hands 2022

ELIXIR All Hands 2022, Amsterdam, Europe Johan Gustafsson, Steven Manos, Nigel Ward, Andrew Lonie, Brian Davis, Sarah Beecroft, Carole Goble, Finn Bacall, Nicola Soranzo, Bjӧrn Grüning, Herve Menager, Hans Ienasescu
9 June 2022

Talk at the ELIXIR All Hands 2022

ELIXIR All Hands 2022, Amsterdam, Europe Björn Grüning
9 June 2022

Workshop at the ELIXIR All Hands 2022, Amsterdam, Netherlands Johan Gustafsson, Steven Manos, Nigel Ward, Andrew Lonie, Brian Davis, Sarah Beecroft, Carole Goble, Finn Bacall, Nicola Soranzo, Bjӧrn Grüning, Herve Menager, Hans Ienasescu
8 June 2022

Workshop at the ELIXIR All Hands 2022, Amsterdam, Netherlands Marianna Ventouratou
8 June 2022

Workshop at the ELIXIR All Hands 2022, Amsterdam, Netherlands Katharina Heil
8 June 2022

Workshop at the ELIXIR All Hands 2022

ELIXIR All Hands 2022, Amsterdam, Europe Katharina Heil
8 June 2022

Workshop at the ELIXIR All Hands 2022

ELIXIR All Hands 2022, Amsterdam, Europe Marianna Ventouratou
7 June 2022

Workshop at the ELIXIR All Hands 2022, Amsterdam, Netherlands Anup Kumar, Kaivan Kamali, Leyla Jael Castro, Fotis E. Psomopoulos and Björn Grüning
7 June 2022

Workshop at the ELIXIR All Hands 2022, Amsterdam, Netherlands Fotis Psomopoulos, Jessica Lindvall, Katharina Heil, Ana P. Melo, Alexia Cardona, Eija Korpelainen, Patricia Palagi, Loredana Le Pera, Eva Alloza, Bérénice Batut, Egon Willighagen
7 June 2022

Workshop at the ELIXIR All Hands 2022

ELIXIR All Hands 2022, Amsterdam, Europe Anup Kumar, Kaivan Kamali, Leyla Jael Castro, Fotis E. Psomopoulos and Björn Grüning
7 June 2022

Members of the ELIXIR Galaxy Community, Tools Platform and the Biodiversity Focus Group will introduce the Vertebrate Genomes Project (VGP) and European Reference Genome Atlas (ERGA) initiatives.

ELIXIR All Hands 2022, Amsterdam, Europe Nicola Soranzo, Bérénice Batut, Anthony Bretaudeau, Johan Gustafsson, Jennifer Harrow, Saskia Hiltemann, Jerry Lanfear, Yvan Le Bras, Krzysztof Poterlowicz, Helena Rasche, Beatriz Serrano-Solano, Andrew Lonie, Frederik Coppens, Björn Grüning
7 June 2022

Workshop at the ELIXIR All Hands 2022

ELIXIR All Hands 2022, Amsterdam, Europe Alex Kanitx, Gavin Farrell, Jennifer Harrow, Jonathan Tedds, Finn Bacall, Tewodros Deneke, Álvaro González, Björn Grüning, Lukáš Hejtmánek, Sven Twardziok, Thanasis Vergoulis
7 June 2022

Workshop at the ELIXIR All Hands 2022

ELIXIR All Hands 2022, Amsterdam, Europe Fotis Psomopoulos, Jessica Lindvall, Katharina Heil, Ana P. Melo, Alexia Cardona, Eija Korpelainen, Patricia Palagi, Loredana Le Pera, Eva Alloza, Bérénice Batut, Egon Willighagen
7 June 2022

Workshop at the ELIXIR All Hands 2022, Amsterdam, Netherlands Alex Kanitx, Gavin Farrell, Jennifer Harrow, Jonathan Tedds, Finn Bacall, Tewodros Deneke, Álvaro González, Björn Grüning, Lukáš Hejtmánek, Sven Twardziok, Thanasis Vergoulis
2 June 2022Galaxy Metabolomics Community Call: Galaxy Interactive Tools - how to create and use them

Dan Blankenberg will present 'How to create and use Galaxy Interactive Tools'

online Melanie Föll
26 May 2022Galaxy Community Call: Galaxy on AnVIL

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Mike Schatz
24 May 2022

European Bioinformatics Institute, Hinxton, United Kingdom Ajay Mishra, Claire O'Donovan, Thomas Payne, Pamela Pruski
24 May 2022

Applications close 18 February

EMBL-EBI, Online, Hinxton, United Kingdom Ajay Mishra, Claire O'Donovan, Thomas Payne, Pamela Pruski
19 May 2022GTN CoFest & Galaxy Papercuts CoFest Day

A community contribution day

Online, Global Community
18 May 2022

The Galaxy Proteomics communities in the US, Australia and Europe regularly come together online to talk about topics of shared interest. All are welcome!

Australian BioCommons, Online, Australia johan@biocommons.org.au
18 May 2022

online de.NBI
17 May 2022

Montpellier, France Stéphanie Bedhomme & Anton Nekrutenko
17 May 2022Small Scale Galaxy Admins Meeting

Online, Global Hans-Rudolf Hotz
12 May 2022Galaxy Community Call: GCC Demo Coordination

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global TBA
9 May 2022

This course covers the basic concepts and methods required for RNA-seq analysis

Hogeschoollaan1, 4818 CR Breda, The Netherlands Andrew Stubbs, Miaomiao Zhou
28 April 2022Galaxy Community Call: The new History

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Aysam Guerler, Marius van der Beek, Beatriz Serrano-Solano
27 April 2022

This course will give a general introduction on the galaxy web-page structure, how to import data, run tools, and share analyses. Participants will run a whole NGS analysis using an RNA-seq dataset as an example.

Lausanne (or online), SwitzerlandTraining offered by GTN Member Lucille Delisle, Hans-Rudolf Hotz
29 March 2022

Microbiome analysis going from samples, to sequencing, to numerical ecology analysis

Earlham Institute & Quadram Institute, Virtual, United KingdomTraining offered by GTN Member Falk Hildebrand
14 March 2022

Get a taste of all the GTN has to offer!

Online, GlobalTraining offered by GTN Member Saskia Hiltemann & Helena Rasche
10 March 2022

online
7 March 2022

Applications close 31 December

EMBL-EBI, Online, Hinxton, United Kingdom Dayane Araújo, Wendi Bacon
3 March 2022

The last 13 weeks have been spent with Outreachy interns, Chinonye Mildred Egenti and Rahmot Afolabi, under the mentorship of Bérénice Batut and Assunta DeSanto to create the Galaxy Mentor Network and her mentoring program.

Chinonye Mildred Egenti, Rahmot Afolabi, Bérénice Batut, Assunta DeSanto
20 January 2022Galaxy Papercuts CoFest Day

A community contribution day

Online, Global Community
18 January 2022Small Scale Galaxy Admins Meeting

Online, Global Hans-Rudolf Hotz
17 January 2022

Register by December 15

Station Biologique de Roscoff, FranceTraining offered by GTN Member Loraine Guéguen, Erwan Corre
9 December 2021

online
1 December 2021SARS-CoV-2 Data Analysis and Monitoring with Galaxy

...upload viral sequencing data, call all variants, create a variety of reports and create consensus alignments...

University of Freiburg, New England Biolabs, OnlineTraining offered by GTN Member Instructors
1 December 2021SARS-CoV-2 Data Analysis and Monitoring with Galaxy

online
1 December 2021

A 3-day training course on bioinformatics methods for de novo assembly and structural and functional annotation of genomes using short (Illumina) and long reads (PacBio / Oxford Nanopore) sequencing technologies (will be run in french).

Station Biologique, Roscoff, FranceTraining offered by GTN Member Anthony Bretaudeau, Alexandre Cormier, Erwan Corre, Stéphanie Robin
30 November 2021

GOBLET, ELIXIR
29 November 2021

Learn to work with NGS data of 16S, 18S, ITS … DNA using our Galaxy instance and the FROGS pipeline.

INRA, Toulouse-Auzeville, FranceTraining offered by GTN Member
29 November 2021

Curso de análisis de células únicas usando Galaxy en español.

Virtual y asincrónico, Global Stefana Dreptate, Wendi Bacon
25 November 2021Galaxy Metabolomics Community Call

Recent developments and future plans in the Galaxy Metabolomics community, including a summary of the metaRbolomics Hackathon.

online Melanie Foell
18 November 2021Galaxy Papercuts CoFest Day

A community contribution day

Online, Global Community
11 November 2021Separated data PVC: How it works and potential missed implications; and 21.09 Release Testing

Join the discsussion (Slides: 21.09 Release Testing)

Galaxy Developer Roundtable, Online, Global Alexandru Mahmoud, Keith Suderman
9 November 2021

CSIR-North East Institute of Science & Technology
8 November 2021Galaxy @ BioHackathon-Europe 2021

Advance the development of an open-source infrastructure for data integration

Barcelona + Online, Spain Project organizers
4 November 2021

Open to everybody interested in Genome Annotation or Galaxy

ELIXIR Czech Republic, CzechiaTraining offered by GTN Member Martin Čech, Petr Novák
2 November 2021

Anne Fouilloux
1 November 2021

Course is full

Earlham Institute, Virtual, United KingdomTraining offered by GTN Member Emily Angiolini
28 October 2021Image analysis in Galaxy - pain points and lessons learnt

Join the discussion. (Video, Slides)

Galaxy Developer Roundtable, Online, Global Yi Sun, Jean-Karim Hériché
22 October 2021

Gallantries Project: Delivering Galaxy hybrid events, and evolving with the pandemic

EOSC-Life training series, Online, Europe Helena Rasche
22 October 2021

Talk showcasing the image analysis capabilities of Galaxy.

Euro-BioImaging Virtual Pub, Online, Europe Beatriz Serrano-Solano
21 October 2021Galaxy Papercuts CoFest Day

A community contribution day

Online, Global Community
20 October 2021

Organised by the Galaxy Proteomics communities in the US, Australia and Europe.

International Galaxy Proteomics Meeting Series, Online, Global Johan Gustafsson, Grace Hall, Pratik Jagtap
19 October 2021

Savoir utiliser l'environnement Galaxy

Bordeaux, FranceTraining offered by GTN Member A. Barré, B. Dartigues, R. Uricaru
11 October 2021

UMR Toxalim, INRAE, Toulouse, France
23 September 2021

microGalaxy is a new community focusing on microbial analysis with Galaxy

Online, Freiburg, Germany Bérénice Batut
16 September 2021Galaxy Papercuts CoFest Day

A community contribution day

Online, Global Community
14 September 2021

Part of Cycle "Bioinformatique par la pratique" 2021

Cycle "Bioinformatique par la pratique" 2021, INRAE, Jouy-en-Josas, FranceTraining offered by GTN Member Mahendra Mariadassou, Cedric Midoux, Olivier Rué
8 September 2021

Part of Cycle "Bioinformatique par la pratique" 2021

Cycle "Bioinformatique par la pratique" 2021, INRAE, Jouy-en-Josas, FranceTraining offered by GTN Member Veronique Martin
9 August 2021SARS-CoV-2 Data Analysis and Monitoring with Galaxy

...upload viral sequencing data, call all variants, create a variety of reports and create consensus alignments...

onlineTraining offered by GTN Member
29 July 2021Utilization of a Galaxy-based workflow to support decision making in molecular cancer diagnostics

online (https://uk-erlangen.webex.com/uk-erlangen/j.php?MTID=mfa8088026974da77de04e981fb3b7abd) Pilot Core Unit Bioinformatics, Data Integration and Analysis, Universitätklinikum Erlangen
25 July 2021Galaxy @ ISMB/ECCB 2021 & BOSC 2021

Lyon, Online, France Presenters
15 July 2021NFDI4BIOIMAGE community meeting 2021

online (https://nfdi4bioimage.de/en/get-involved/community-meeting-2021/) NFDI4BI
12 July 2021Galaxy-E at SORTEE 2021

Open, reliable, and transparent ecology research with Galaxy-E

SORTEE 2021, Online, GlobalTraining offered by GTN Member Yvan Le Bras
28 June 2021

online
24 June 2021Introduction to Galaxy - a web-based platform for bioinformatics analysis

online (https://uk-erlangen.webex.com/uk-erlangen/j.php?MTID=mfa8088026974da77de04e981fb3b7abd) Pilot Core Unit Bioinformatics, Data Integration and Analysis, Universitätklinikum Erlangen
21 June 2021

17 June 2021June GCC2021 CoFest Prep Day

GCC Cofest prep is pre-empting the June Papercuts day

Online, Global GCC2021 CoFest Organizers
11 June 2021

Showcasing the image analysis capabilities of Galaxy.

OME Community Meeting, Online, Global Beatriz Serrano-Solano
7 June 2021

Register by 14 April (Video)

Holistic Bioinformatic Approaches used in Microbiome Research, Online, Global Bérénice Batut
3 June 2021ELIXIR 2021 All Hands

online
28 May 2021

Gathering the Dutch Galaxy Community

Online, The Netherlands Saskia Hiltemann
28 May 2021

Full. Part of Cycle "Bioinformatique par la pratique" 2021

Cycle "Bioinformatique par la pratique" 2021, INRAE, Jouy-en-Josas, FranceTraining offered by GTN Member Valentin Loux, Hélène Chiapello
27 May 2021Release Testing

What's changed recently, and what's involved (Video, Slides)

Galaxy Developer Roundtable, Online, Global Keith Suderman, Dave Bouvier, David López, Qiang Gu, Vijay Nagampal, Marius van den Beek
27 May 2021

Full. Part of Cycle "Bioinformatique par la pratique" 2021

Cycle "Bioinformatique par la pratique" 2021, INRAE, Jouy-en-Josas, FranceTraining offered by GTN Member Valentin Loux, Jean-François Gibrat, Thomas Lacroix
26 May 2021Galaxy Resources for Administrators & Infrastructure Providers

Part of the Galaxy Resources Webinar Series (Slides, Video)

Galaxy Resources Webinar Series, Online, Global Gianmauro Cuccuru, Lucille Delisle
25 May 2021

Full. Theoretical and practical aspects of using next generation sequencing (NGS) data for analyzing repeat composition of plant genomes. (Register)

Institute of Plant Molecular Biology, Online, Ceske Budejovice, Czech Republic Jiří Macas
25 May 2021

Introduction to basic concepts and tools from the ASaiM-MT workflow.

VIB, Online, Ghent, BelgiumTraining offered by GTN Member Pratik Jagtap, Subina Mehta, Tim Griffin, Magnus Arntzen, Saskia Hiltemann
20 May 2021Galaxy Papercuts CoFest Day: May 20

A community contribution day

Online, Global Community
13 May 2021Customizeable welcome and introduction page for new Galaxy users

Giving new users some obvious guidance when they first arrive. (Video, Slides)

Galaxy Developer Roundtable, Online, Global Alex Ostrovsky
12 May 2021Galaxy Resources for Tool Developers

Part of the Galaxy Resources Webinar Series (Video, Ecosystem slides, Docker slides, Server slides)

Galaxy Resources Webinar Series, Online, Global Dan Blankenberg, Anthony Bretaudeau, Petr Novak
6 May 2021Galaxy Metabolomics Community Call

online Melanie Foell
4 May 2021

Savoir utiliser l'environnement Galaxy

Bordeaux, FranceTraining offered by GTN Member A. Barré, B. Dartigues, R. Uricaru
29 April 2021Scalability and Challenges

(Slides, Video)

Galaxy Developer Roundtable, Online, Global Aysam Guerler
28 April 2021

SIB Training, Lausanne, Switzerland
28 April 2021Galaxy Resources for Educators & Trainers

Part of the Galaxy Resources Webinar Series (Video, Slides 1, Slides 2)

Galaxy Resources Webinar Series, Online, Global Saskia Hiltemann, Subina Mehta, Christine Cucinotta, Miaomiao Zhou, Bérénice Batut
26 April 2021

online
22 April 2021

immuneML is a platform for the analysis of adaptive immune receptors through machine learning. (Video)

RSG-Norway, Online, Norway Lonneke Scheffer, Milena Pavolović
21 April 2021Galaxy Resources for Researchers

Part of the Galaxy Resources Webinar Series (Slides, Video)

Galaxy Resources Webinar Series, Online, Global Dave Clements
19 April 2021

...with a special focus on bulk and single-cell RNA-Seq data analysis...

University of Freiburg, Online, Freiburg, GermanyTraining offered by GTN Member Instructors
16 April 2021

a high level overview of the Galaxy Project - what it is, what it does and how to start using it. And the Elixir Galaxy and currently forming Galaxy Czech communities (Slides)

ELIXIR CZ, Online, Czech Republic Martin Čech
15 April 2021Galaxy Papercuts CoFest Day: April 15

A community contribution day

Online, Global Community
13 April 2021

Online course by ELIXIR Norway

ELIXIR Norway, Online, NorwayTraining offered by GTN Member ELIXIR Norway
12 April 2021

Next generation sequencing for RNA-Seq and Epigenetics

de.NBI / de.STAIR, Online, GermanyTraining offered by GTN Member Steffen C. Lott, David Brauer, Markus Wolfien, Maximilian Hillemanns, Konstantin Riege
7 April 2021

Online course by ELIXIR Norway

ELIXIR Norway, Online, NorwayTraining offered by GTN Member ELIXIR Norway
6 April 2021

Full. Part of Cycle "Bioinformatique par la pratique" 2021

Cycle "Bioinformatique par la pratique" 2021, INRAE, Jouy-en-Josas, FranceTraining offered by GTN Member Mahendra Mariadassou, Cedric Midoux, Olivier Rué
24 March 2021Speed up your data analysis with Galaxy: Features no one knows about

online Galaxy and ELIXIR
23 March 2021

Online course by ELIXIR Norway

ELIXIR Norway, Online, NorwayTraining offered by GTN Member ELIXIR Norway
18 March 2021Bringing GPU support to Galaxy

Progress towards executing GPU applications in Galaxy (Video)

Galaxy Developer Roundtable, Online, Global Jashwant Raj, Gulsum Gudukbay
18 March 2021Galaxy Papercuts CoFest Day: March 18

A community contribution day

Online, Global Community
17 March 2021Galaxy bridge to Jupyter notebooks and RStudio

Jupyter Notebooks and RStudio in combination with Galaxy workflows (Video, Slides)

online Galaxy and ELIXIR
17 March 2021

Full. Part of Cycle "Bioinformatique par la pratique" 2021

Cycle "Bioinformatique par la pratique" 2021, INRAE, Jouy-en-Josas, FranceTraining offered by GTN Member Cyprien Guérin, Valentin Loux, Christelle Hennequet-Antier, Julie Aubert
10 March 2021Processing thousands of datasets simultaneously

online Galaxy and ELIXIR
10 March 2021

Galaxy collections and advanced collections features (Register)

Galaxy-ELIXIR Advanced Features webinar series, Online, Europe Wolfgang Maier, Anton Nekrutenko
4 March 2021Release Testing

What's changed recently, and what's involved (Slides, Video)

Galaxy Developer Roundtable, Online, Global Sergey Golitsynskiy, David López, Assunta DeSanto, Keith Suderman, John Chilton
3 March 2021Advanced Galaxy workflow features

From parameter sweeping to automatic reports (Slides, Video)

online Galaxy and ELIXIR
25 February 2021GTN CoFest & Galaxy Paper Cuts

online
24 February 2021DRS, long-read-sequencing, proteomics and more - An update to recent COVID-19 workflow developments

online Galaxy and ELIXIR
17 February 2021Viral Beacon and Galaxy variant workflows

online Galaxy and ELIXIR
17 February 2021

Part of Cycle "Bioinformatique par la pratique" 2021

Cycle "Bioinformatique par la pratique" 2021, Online, INRAE, Jouy-en-Josas, FranceTraining offered by GTN Member Valentin Loux, Cédric Midoux
16 February 2021

Full. Part of Cycle "Bioinformatique par la pratique" 2021

Cycle "Bioinformatique par la pratique" 2021, INRAE, Jouy-en-Josas, FranceTraining offered by GTN Member Olivier Inizan, Mouhamadou Ba
15 February 2021GTN Smörgåsbord: A Global Galaxy Course

Get a taste of all the GTN has to offer!

Online, GlobalTraining offered by GTN Member Saskia Hiltemann & Helena Rasche
10 February 2021Insights from selection analysis of complete genomes and read-level data

online Galaxy and ELIXIR
4 February 2021Galaxy Developer Training & Onbarding; GTN Update

How to grow the Galaxy Developer community? Admin Training Update (Slides, Video)

Galaxy Developer Roundtable, Online, Global Dannon Baker, Beatriz Serrano-Solano, Dave Clements, Saskia Hiltemann, Helena Rasche
3 February 2021Supporting the COVID-19 Data portal: viral data cleaning from human reads and submission to ENA

online Galaxy and ELIXIR
27 January 2021Importance of (open) infrastructures in responding to a pandemic

online Galaxy and ELIXIR
25 January 20212021 Galaxy Admin Training

The ins and outs of setting up your own production quality Galaxy server.

Online, GlobalTraining offered by GTN Member Instructors
21 January 2021Galaxy Developer Roundtable: FastAPI

(Video)

Online, Global Marius van den Beek
21 January 2021Galaxy Papercuts CoFest Day: January 21

A community contribution day

Online, Global Community
20 January 2021COVID-19 analysis in Galaxy: Lessons learned and introduction to the series

online Galaxy and ELIXIR
7 January 2021Galaxy Working Groups Follow Up and Discussion

How are we doing after a month? (Video)

Galaxy Developer Roundtable, Online, Global Björn Grüning, Anton Nekrutenko
17 December 2020Galaxy Papercuts CoFest Day: December 17

A community contribution day

Online, Global Community
10 December 2020Galaxy Working Groups: Distributing project guidance to the community

Distributing Galaxy Guidance: Working Groups (Video)

Galaxy Developer Roundtable, Online, Global Björn Grüning, Anton Nekrutenko
10 December 2020First Metabolomics Community Call

Bringing together Galaxy metabolomics researchers, users and developers, to discuss needs, ideas, ...

online Melanie Foell
9 December 2020Webinar: Use Galaxy on the web, the cloud, and your laptop too

Options for using Galaxy: everywhere and right now (Slides, Video)

Online, Global Enis Afgan, Anton Nekrutenko, Michael Schatz
7 December 2020Hackathon sur les outils interactifs de Galaxy (GxIT)

Learn and share software development and system administration skills of [Galaxy Interactive Tools](https://docs.galaxyproject.org/en/master/admin/special_topics/interactivetools.html).

online geoc@groupes.renater.fr
3 December 2020

Label-free Proteomics data analysis in Galaxy

VIB, Online, Ghent, BelgiumTraining offered by GTN Member Melanie Föll, Matthias Fahrner
19 November 2020

Galaxy Training Network
19 November 2020Galaxy Training Network day - (online) CoFest and community call

Online, GlobalTraining offered by GTN Member Saskia Hiltemann & Helena Rasche
18 November 2020Galaxy Paper Cuts Day: November 18

A community contribution day

Online, Global Community
12 November 2020Working with the Galaxy Training Network

Galaxy Training Network (Video)

Galaxy Developer Roundtable, Online, Global Helena Rasche and Saskia Hiltemann
9 November 2020ELIXIR BioHackathon Europe

online
3 November 2020Diving into the Galaxy: an accessible and reproducible workbench with an European-wide distributed compute network

online EGI
29 October 2020Galaxy Developer Roundtable

Tool testing and tool deployment discussion (Video)

Online, Global Dannon Baker, John Chilton, Marius van den Beek
21 October 2020Galaxy Paper Cuts Day

A community contribution day

Online, Global Community
15 October 2020

online
15 October 2020Galaxy release testing and publishing workflows to Dockstore and Workflowhub

(Video)

Online, Global Sergey Golitsynskiy, Marius van den Beek
12 October 2020

Bridging the gap between climate scientists and non-climate specialists

JupyterCon, Online, Europe Anne Fouilloux
1 October 2020Galaxy Developer Roundtable

online
17 September 2020Galaxy Developer Roundtable

online
8 September 2020The ELIXIR Tools Platform - solutions for COVID-19 research

online Freiburg Galaxy Team
31 August 2020Machine Learning & Omics data at ECCB2020

online Freiburg Galaxy Team
30 July 2020Galaxy Africa Community Update

Online
19 July 2020High-throughput molecular dynamics with Galaxy

Online Freiburg Galaxy Team
19 July 2020Processing of Single Cell RNA-Seq Data with Galaxy

Online Freiburg Galaxy Team
18 July 2020Reference data with CVMFS and remote jobs with Pulsar

Online Freiburg Galaxy Team
18 July 2020Introduction to Machine Learning at BCC2020

online Freiburg Galaxy Team
18 July 2020Workshop on Tool Packaging at BCC2020

online EOSC-Life-WP2
17 July 2020Biocontainers at the nf-core Hackathon

online Freiburg Galaxy Team
17 July 2020Processing of Single Cell RNA-Seq Data with Galaxy

Online Freiburg Galaxy Team
15 July 2020Machine Learning in Bioinformatics using Galaxy at IISA2020

online Freiburg Galaxy Team
22 June 2020Galaxy-ELIXIR Webinar/Workshop: Machine Learning using Galaxy

Register by 16 June

onlineTraining offered by GTN Member Freiburg Galaxy Team and ELIXIR
28 May 2020Galaxy-ELIXIR Webinar 5: Behind the scenes - Global Open Infrastructures at work

Galaxy and ELIXIR
20 May 2020Galaxy-ELIXIR Webinar 4: Evolution of the Virus

online Galaxy and ELIXIR
19 May 2020Online Galaxy Introduction Workshop

online Freiburg Galaxy Team
14 May 2020Galaxy-ELIXIR Webinar 3: Cheminformatics - Screening of the main protease

online Galaxy and ELIXIR
7 May 2020Galaxy-ELIXIR Webinar 2: Genomics/Variant Calling

online Galaxy and ELIXIR
30 April 2020Galaxy-ELIXIR Webinar 1: Introduction to Galaxy and the Galaxy workflows for SARS-CoV-2 data analysis

online Galaxy and ELIXIR
28 April 2020ELIXIR Bioinformatics Industry Forum

online
8 April 2020Online Galaxy Introduction Workshop

online Freiburg Galaxy Team
30 March 2020EVENT POSTPONED - Introduction to machine learning using Galaxy

PC Pool 3 Freiburg Galaxy Team
20 March 2020WirVsVirus Hackathon

online Bundesregierung
2 March 20202020 Galaxy Admin Training

Barcelona Supercomputing Center
18 November 2019Elixir Biohackathon 2019

Campus des berges de Seine Elixir, Elixir-FR
16 May 2019GTN CoFest and community call

Online Bérénice Batut, Saskia Hiltemann
21 February 2019GTN CoFest and call on Galaxy Training Material

Online Bérénice Batut, Saskia Hiltemann
15 November 2018GTN CoFest on Training Material

Galaxy Training Network
12 November 2018Elixir Biohackathon 2018

Campus des berges de Seine Elixir, Elixir-FR, NBDC, DBCLS, COST
6 November 2018NGS Introduction using Galaxy

VIB Elixir Belgium and VIB
17 October 2018Bioinformatics for Translational Medicine using Galaxy: see it, do it, teach it!

VU Elixir-NL, VU Amsterdam, Erasmus Medical Center
27 August 2018Next Generation Sequencing data analysis, LUMC

LUMC, Building 1, CZ-3 and computerrooms 1-82 and J1-83 MGC
17 August 2018GTN CoFest on Metagenomics Training Material

Galaxy Training Network
27 July 2018System Administrator Appreciation Day

online Appreciative users
26 June 2018Galaxy Community Conference / BOSC

Galaxy Team
17 June 2018ELIXIR 2019 All Hands

22 May 2023

We are happy to announce that the next edition of the GTN Smörgåsbord training event will take place on **May 22-26, 2023**! It will once again be **free, online, self-paced, and choose-your-own-adventure style**. It will feature all the content of previous editions, plus lots more!

Online, GlobalTraining offered by GTN Member Saskia Hiltemann & Helena Rasche
19 April 2023

Workshop 'BioImaging and the European Open Science Cloud' organised by Euro-BioImaging ERIC in collaboration with EOSC-Life

Heidelberg, Germany Bugra Ozdemir & Beatriz Serrano-Solano