Workshop on high-throughput sequencing data analysis with Galaxy
This course introduces scientists to the data analysis platform Galaxy. The course is a beginner course; there is no requirement of any programming skills.
General information
- Date: March 10-14, 2025
- Format: on-site
- Location: Werthmanstrasse 4, Freiburg, Germany
- Time: 9:15am-5pm CEST
- Cost: Free
- Contact: Daniela Schneider (schneidd@informatik.uni-freiburg.de)
Pedagogical information
Target Audience: Scientist with no or little Galaxy experience who want to analyse sequencing data.
Learning Objectives:
- To get introduced to Galaxy as data analysis platform and the GTN training material
- To learn how to use use tools and databases in Galaxy
- To be able to run different tools and workflows
Training material: For the hands-on course, we will use the training material from the Galaxy Training Network.
Preliminary schedule (can be adjusted to the demand of the participants)
| Day | Start | End | Session | Instructors |
|---|---|---|---|---|
| March 10th | 9:15am | 4pm | Welcome - Galaxy introduction - Quality control | |
| March 11th | 9:15am | 5pm | ChIP-Sequencing | |
| March 12th | 9:15am | 5pm | RNA-Sequencing | |
| March 13th | 9:15am | 5pm | Variant Calling/Exome Seqencing | |
| March 14th | 9:15am | 4pm | Metagenomics/ Foodborne |
Registration
The number of places in this workshop is limited. The course takes place only in person (not online, not hybrid). There are no fees for the workshop but you need to care for your accommodation, travel costs and catering by yourself.
Please apply here with this form for a spot in the workshop. Participants will be informed about their selection until mid of February 2025.
If you have further questions, please contact Daniela Schneider (schneidd@informatik.uni-freiburg.de)
Supporters
This event is generously supported by DataPLANT, EuroScienceGateway and de.NBI.
