Galaxy Community Hub

German Network for Bioinformatics Infrastructure Service, Training, Cooperations & Cloud Computing

de.NBI is a national, academic, and non-profit research infrastructure initiated in 2015 as a joint project of the Federal Ministry of Research, Technology and Space (BMFTR).

526 contributions

German Network for Bioinformatics Infrastructure Service, Training, Cooperations & Cloud Computing
Hall of Fame
Contributors (16)
Bérénice Batut Björn Grüning Daniela Schneider David López Anika Erxleben Melanie Föll Gianmauro Cuccuru Helena Rasche Leonid Kostrykin Mina Hojat Ansari Mira Kuntz Paul Zierep Pavankumar Videm Teresa Müller Thomas Wollmann Wolfgang Maier

News (386)

How using collections saved my data

Why you should ask help from the Galaxy experts

Galaxy Metagenome Training Course 2026

Outcomes of the 2026 Metagenome Training Course

UCSC staff visit: enhancing the Genome Browser - Galaxy integration

UCSC staff and Freiburg Galaxy team members had a first meeting on deepening collaboration and integration between the Genome Browser and Galaxy.

Making Galaxy Greener with the Job Cache

Galaxy's job cache improves performance, supports large training events, and advances environmental sustainability efforts within ELIXIR-STEERS by reducing redundant tool executions

Ten Common Misconceptions About Galaxy (And Why They’re Wrong!)

We are thrilled to announce that 'Ten Common Misconceptions About Galaxy (And Why They Are Wrong!)' has just been published in PLOS Computational Biology! This paper is the result of passionate discussions, collaborative debates, and a shared commitment to clarifying what Galaxy truly is—and what it can do. Whether you are a longtime Galaxy user or new to the platform, this paper will challenge assumptions and highlight Galaxy's versatility, scalability, and impact across disciplines.

Connecting Humanities Data: Analyzing DaSCH data on Galaxy

We're excited to announce the collaboration between DaSCH, the Swiss National Data and Service Center for the Humanities, and the data analysis platform Galaxy.

Integration of the Hugging Face Hub with Galaxy

Galaxy users can now browse the Hugging Face Hub as a repository source, import models straight into their histories, and feed them into tools. A step-by-step example shows how to pull models from the Hugging Face Hub into Galaxy and then using the existing DocLayout-YOLO tool for document layout segmentation.

4th BioHackathon Germany

Training Infrastructure Feedback from Hans-Rudolf Hotz and Lucille Delisle

Teaching about galaxy and its workflow capabilities.

One framework, one workflow, many communities: Freiburg Galaxy team at EOSC Symposium 2025

Galaxy showed how 'one framework, one workflow, many communities' can run cross-disciplinary imaging analyses on the emerging EOSC Federation. Here is what we presented, with slides and video.

Tabula Sapiens and Tabula Muris Senis Atlases Now Available in Galaxy

Comprehensive Single-Cell Reference Atlases Ready for Import

Let’s write History–Galaxy at the Historikertag 2025 in Bonn

Get your historic material ready - Galaxy supports your endeavours in Digital History

Galaxy at the Conference on Research Data Infrastructure (CoRDI) 2025 in Aachen

Galactic views on the Conference on Research Data Infrastructure

Training Infrastructure as a service (TIaaS) Feedback from Dr. Janne M. Toivonen

Thanks to TIaaS, our RNA-Seq workshops run smoothly—no more delays, just effective hands-on learning.

Galaxy Workshop for Humanities and Social Sciences in Freiburg

Introducing Galaxy and Digital Humanities on site

Vizgen Postprocessing Tool (VPT) now available in Galaxy

Reprocess and refine the single-cell results of MERSCOPE experiments

Training Infrastructure Feedback from the MSc Program „Translational Medical Research“ (TMR), Medical Faculty of Mannheim, University of Heidelberg; WS 2024/25

From sequencing to R scripting—TIaaS helped us turn RNA-Seq into a hands-on learning success for future medical researchers.

Streamlining Bioinformatics Training with Galaxy TIaaS: A Wet Lab Success Story

No more setup headaches—TIaaS lets us deliver scalable, hands-on bioinformatics training that just works.

Lights, Camera... Hacking! Highlights from the Galaxy Imaging Hackathon 2025

Three days of collaborative hacking, coffee-fueled brainstorming, and community-powered innovation—Galaxy Imaging is growing, and so are its FAIR tools!

Empowering Genomics Education with Galaxy TIaaS

TIaaS and Galaxy are transforming how we teach genomics—making hands-on bioinformatics accessible to every student, no coding required.

Events (140)

Enter the Galaxy: How to leverage the open source platform Galaxy for the Digital Humanities and Social Sciences

DOMPS SYMPOSIUM 2026

The use of AI in biological research

Galaxy Metagenome Training Course 2026

Join us online in the 2026 Metagenome Training Course

Galaxy Metagenome Training Course 2026

Join us online in the 2026 Metagenome Training Course

Practical Variant Effect Prediction with Deep Mutational Scanning Data

A webinar in the de.NBI & ELIXIR-DE and GHGA knowledge series

Galaxy for analysis of human health data

A webinar in the de.NBI & ELIXIR-DE and GHGA knowledge series

Introducing Galaxy Tools and Workflows for the University Library Freiburg

2025 Galaxy Admin Training

Learn how to set up your own production quality Galaxy server

FAIRyMAGs Hybrid Hackathon 2025: Optimising Metagenomics Assembled Genomes building 🚀

This 4-day hybrid hackathon aims to optimize Metagenomics Assembled Genomes Building workflows

European Galaxy Days (EGD)

European Galaxy Days meeting in Autumn 2025

Workshop - Introduction to Galaxy for Digital Humanities and Research Data Management

Join us for our workshop introducing Galaxy for Digital Humanities and Research Data Management in Freiburg

Tools Platform and Single Cell Omics: ’Bring Your Workflow’ to WorkflowHub

Discover how to make your workflows FAIR, citable, and shareable at this hands-on ELIXIR event with WorkflowHub and Single Cell Omics experts.

Galaxy Europe presents at the “Data Snacks” Series – Presentation by Dr. Sanjay Kumar Srikakulam

Discover how Galaxy simplifies data analysis and management across scientific fields during the next Data Snacks session!

Workshop on high-throughput sequencing data analysis with Galaxy

This course introduces scientists to the data analysis platform Galaxy. The course is a beginner course; there is no requirement of any programming skills.

Research Data Management with RSpace and Galaxy - Talk and Q&A

Discover how RSpace's open-source solutions promote innovation and collaboration in research data management (RDM).

microGalaxy Meets IWC - A Hackathon for microbial data analysis workflow FAIRification

One-day hackathon focused on integrating, refining, and FAIRifying microbial data analysis Galaxy workflows within the Intergalactic Workflow Commission (IWC), enhancing their accessibility, reusability for the microbiology community

Workshop on high-throughput sequencing data analysis with Galaxy

This course introduces scientists to the data analysis platform Galaxy. The course is a beginner course; there is no requirement of any programming skills.

Ask Us Anything about Galaxy live webinar

The European Galaxy Team offers a Q&A session for all users

Workshop on high-throughput sequencing data analysis with Galaxy

This course introduces scientists to the data analysis platform Galaxy. The course is a beginner course; there is no requirement of any programming skills.

de.NBI: Galaxy Microbial Genomics Course - 2024

This course will provide an overview of the field of genomics and how to use the Galaxy platform for genome analysis, with the main focus on the assembly and annotation of bacterial genomes.