Welcome everybody, and thank you for joining this course!

Everything you need for this course can be found on this webpage. More information including links to all training materials can be found by clicking on each session

Note: You can also switch to the rich view version of this page.

Welcome & Practical Information

Start here. This will cover all the logistics and practical information for this training week.

Topic Presentor Type Video Length GTN material FAQ Slack
Welcome & Course Information Helena Rasche Saskia Hiltemann Lecture Video Slides link #event-gcc2021
Get set up for the course custom Video
About Certificates custom Video
Meet & Join the Galaxy Community! The Global GTN Community Video GalaxyProject Home Galaxy servers Galaxy Training Network Support Galaxy Publications Galaxy Communities Events Mailing Lists Galaxy Working Groups GitHub Gitter Chat GTN Gitter PaperCuts GTN CoFest Twitter Twitter
Webinar Series: Galaxy Resources For.. Webinar Series: Galaxy Resources For.. Video Galaxy Webinar Page #event-gcc2021
Daily Icebreaker Questions custom Video

Note: Length indicates the duration of the video. If you want to follow along and/or perform the tutorial yourself, it will likely take longer to complete.

Galaxy Tool Development

This module covers everything you need to start developing your own Galaxy Tools. This module will likely take you several days to complete.

Topic Presentor Type Video Length GTN material FAQ Slack
Galaxy Tools: From Conda Through Deployment Alex Ostrovsky Video Tutorial link #dev-tools-conda
ToolFactory: Generating Tools From Simple Scripts Video Tutorial Tutorial link #dev-toolfactory

Note: Length indicates the duration of the video. If you want to follow along and/or perform the tutorial yourself, it will likely take longer to complete.

Galaxy Training Material Development

Here you can learn about contributing to the GTN’s development, adding new tutorials or slides, and correcting any typos you might spot in the training materials this week.

Topic Presentor Type Video Length GTN material FAQ Slack
The GTN & Training Material Development Tutorial Video Tutorial 1 Tutorial 2 Related tutorial Slides link #contributing-gtn

Note: Length indicates the duration of the video. If you want to follow along and/or perform the tutorial yourself, it will likely take longer to complete.

Galaxy Core Development

Ever wanted to contribute features to Galaxy? Here you’ll learn a bit about how Galaxy works and how to debug issues in features in Galaxy.

Topic Presentor Type Video Length GTN material FAQ Slack
Debugging Galaxy Tutorial Video Tutorial link #dev-debugging-galaxy

Note: Length indicates the duration of the video. If you want to follow along and/or perform the tutorial yourself, it will likely take longer to complete.

Galaxy Architecture Lectures

Here you’ll learn about the internals of Galaxy in a lecture from John Chilton

Topic Presentor Type Video Length GTN material FAQ Slack
Galaxy Architecture John Chilton Lecture Series & Self-study Tutorial Video Slides Self-study tutorial Youtube Playlist link #dev-galaxy-core

Note: Length indicates the duration of the video. If you want to follow along and/or perform the tutorial yourself, it will likely take longer to complete.

Self-Study Galaxy Development

These tutorials don’t have video walkthroughs, but will all be supported by their authors during the week. So please work through these tutorials by yourself, and ask LOTS of questions in Slack!

Topic Presentor Type Video Length GTN material FAQ Slack
BioBlend: Scripting Galaxy using the API Self-study Tutorial Video Slides Tutorial link dev-bioblend
Contributing to BioBlend Development Self-study Tutorial Video Tutorial link dev-bioblend
Contributing extensions to Galaxy core Self-study Tutorial Video Tutorial link #dev-galaxy-core

Note: Length indicates the duration of the video. If you want to follow along and/or perform the tutorial yourself, it will likely take longer to complete.