Program for the Galaxy User Conference
Our preliminary program for the Galaxy User Conference is now ready.
Our preliminary program for the Galaxy User Conference is now ready. You can fine more information here and register here.
Thursday, 15.03.2018
| 09:00-10:00 | Registration & morning Coffee | |
| 10:00-10:30 | Welcome | Björn Grüning (Freiburg, Germany) |
| 10:30-11:00 | de.NBI & RBC | Andreas Tauch (Bielefeld, Germany) , Rolf Backofen (Freiburg, Germany) |
| 11:00-11:30 | DNA methylation signatures follow preformed chromatin compartments in cardiac myocytes | Stephan Nothjunge (Freiburg, Germany) |
| 11:30-12:00 | Analysis of the cardiac myocyte epigenome using Galaxy | Ralf Gilsbach (Freiburg, Germany) |
| 12:00-12:30 | Using direct reprogramming to find the master regulators of renal tubulogenesis and factors leading to congenital kidney defects | Sören Lienkamp (Freiburg, Germany) |
| 12:30-13:30 | Lunch | |
| 13:30-14:00 | Galaxy tools and workflows for metabolomics: A community effort to make data processing and analysis accessible, reproducible, and transparent. | Ralf Weber (Birmingham, UK) |
| 14:00-14:30 | Workflow4Metabolomics - Towards an international computing infrastructure and a tools showcase for Metabolomics | Gildas Le Corguillé (Roscoff, France), Christophe Caron (Rennes) |
| 14:30-15:00 | Deployment of genome databases for insects using Galaxy Genome Annotation | Anthony Bretaudeau (Rennes France) |
| 15:00-15:30 | Coffee break | |
| 15:30-16:00 | Galaxy-E: A french initiative dedicated to Macro-Ecological data analysis | Yvan Le-bras (Rennes, France) |
| 16:00-16:30 | The ELIXIR Communities | John Hancock (ELIXIR, UK), Frederik Coppens (Gent, Belgium) |
| 16:30 | usegalaxy.eu/au launch | Björn Grüning (Freiburg, Germany), Simon Gladman (Melbourne, Australia) |
| 19:00 | Dinner at Martinsbräu (everybody pays by its own) |
Friday, 16.03.2018
| 09:00-09:30 | The Beerome – Science for the Mind and the Stomach | Teresa Müller (Freiburg, Germany) |
| 09:30-10:00 | Gene discovery with KnetMiner | Ajit Pratap Singh (Hertfordshire, UK) |
| 10:00-10:30 | Fruit Fly reproduction | Ihor Yurkevych (Ivano-Frankivsk, Ukraine) |
| 10:30-11:00 | Coffee break | |
| 11:00-11:30 | Proteomic analyses of mass spectrometry data using OpenMS in Galaxy | Matthias Fahrner (Freiburg, Germany) |
| 11:30-12:00 | Quality control and analysis of large scale MALDI imaging data of peptides from formalin-fixed paraffin-embedded tissues within the Galaxy environment |
Melanie Föll (Freiburg, Germany) |
| 12:00-12:30 | Galaxy for microscopy image analysis workflows and systematic phenotyping | Thomas Wollmann (Heidelberg, Germany) |
| 12:30-13:30 | lunch | |
| 13:30-14:00 | RNA Workbench | Florian Eggenhofer (Freiburg, Germany) |
| 14:00-14:30 | Integrated analysis of miRNA-mRNA regulatory networks in chordoma tumors using Galaxy | Beata Scholz (Debrecen, Hungary) |
| 14:30-15:00 | Extracting biological sense from RNA-seq time series in dynamic biological systems | Daria Onichtchouk (Freiburg, Germany) |
| 15:00-15:30 | Coffee Break | |
| 16:00-16:30 | Microbiota analysis using Galaxy | Saskia Hiltemann (Rotterdam, Netherlands) |
| 15:30-16:00 | Galaxy Australia/USA communities | Simon Gladman (Melbourne, Australia), Anton Nekrutenko (PSU, USA) |
| 16:30-17:00 | The Galaxy Training Network | Bérénice Batut (Freiburg, Germany) |