UseGalaxy.eu Tool Updates for 2019-10-17
On 2019-10-17, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #145
HCA-Single Cell
- retrieve_scxa was updated to cc21614b6693
- scanpy_compute_graph was updated to e7fd6981c0f0
- scanpy_filter_cells was updated to dcfb23758646
- scanpy_filter_genes was updated to 7aebd6265a97
- scanpy_find_cluster was updated to ee181563bae7
- scanpy_find_markers was updated to 71668dd2d47b
- scanpy_find_variable_genes was updated to b089f4a55e6b
- scanpy_normalise_data was updated to e541f264fad2
- scanpy_read_10x was updated to 3faf577f3e40
- scanpy_run_pca was updated to 7798c318e7d7
- scanpy_run_tsne was updated to 2e74fd7b5f45
- scanpy_run_umap was updated to 0ac2f9f2313b
- scanpy_scale_data was updated to 9acb5f068e6b
- ucsc_cell_browser was updated to 679dfd1dd63b
Mapping
- rna_starsolo was updated to c23da6257d6a
Variant Calling
- snpeff was updated to de67e5082c48
RNA Analysis
- alevin was updated to e53f19161c59
- salmon was updated to 7fdb9d1591e2
- salmonquantmerge was updated to 178ebdfe5a7e
- dexseq was updated to 4ca0e679f21e
ChemicalToolBox
- bio3d_rmsf was updated to e838317708a6
- gmx_sim was updated to 1a5960636405
Single-cell
- anndata_export was updated to a9ab1b0a00dd
- anndata_import was updated to a61350ab6563
- anndata_inspect was updated to 05304c5c195d
- anndata_manipulate was updated to 19592ec717ef
- dropletutils was updated to f0de368eabca
- scanpy_cluster_reduce_dimension was updated to 20cfb9f3dded
- scanpy_filter was updated to 6a76b60e05f5
- scanpy_inspect was updated to a755eaa1cc32
- scanpy_normalize was updated to a9f14e2d1655
- scanpy_plot was updated to e4c0f5ee8e17
- scanpy_remove_confounders was updated to a89ee42625ad