UseGalaxy.eu Tool Updates for 2020-10-10
On 2020-10-10, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #238
Assembly
- colibread_lordec was updated to 435a98f01ae9
- novoplasty was updated to 7c2f5268d01c
Phylogenetics
- gstf_preparation was updated to 51a7a2a82902
Multiple Alignments
- kc_align was updated to 1c65ddbaeefa
- kc_align was updated to 0c0288a9d92c
- mummer_delta_filter was updated to b3acbb3a6af0
- mummer_dnadiff was updated to 60698466facd
- mummer_mummer was updated to 48823c9635a4
- mummer_mummerplot was updated to ebe3b0f84de9
- mummer_nucmer was updated to 636b049e6141
- mummer_show_coords was updated to 959c1f8dae95
Quality Control
- multiqc was updated to 5e33b465d8d5
hca_sc_scanpy_tools
- scanpy_compute_graph was updated to 087a7edb0995
- scanpy_find_cluster was updated to b531acda966c
- scanpy_find_markers was updated to 1670af5eee46
Variant Calling
- artic_minion was updated to a346730e5552
- lofreq_alnqual was updated to 09d6e4693887
- lofreq_call was updated to e1461b5c52a0
- lofreq_indelqual was updated to 426d707dfc47
- lofreq_viterbi was updated to aa35ee7f3ab2
- plink was updated to 66b35562554d
- lofreq_filter was updated to 7dfca164d2e3
- lofreq_viterbi was updated to dbd9f2db9ed8
RNA Analysis
- alevin was updated to 04b494623f8e
- salmon was updated to cc05793bb896
- salmonquantmerge was updated to cfb0849582e1
- tetoolkit_tetranscripts was updated to 313414e9abcf
- transdecoder was updated to c6334cb383ff
- seurat was updated to 321bdd834266
- seurat was updated to 7a5cd7987b03
ChemicalToolBox
- chembl was updated to 1d6fb7967ae9
- chembl_structure_pipeline was updated to 2f59c6239f25
Text Manipulation
- text_processing was updated to ddf54b12c295
Proteomics
- cardinal_classification was updated to 2308bd817e3e
- cardinal_combine was updated to 7cd9208028bf
- cardinal_data_exporter was updated to 137bfc63e758
- cardinal_filtering was updated to 2aefa66e48e5
- cardinal_mz_images was updated to 08ebd8da780c
- cardinal_mz_images was updated to daf2ee9127fd
- cardinal_segmentations was updated to 0159b15b1281
- cardinal_spectra_plots was updated to 0b7e00e5b9d2
- cardinal_spectra_plots was updated to d2596e1be091
- openms_accuratemasssearch was updated to 0056247c6934
- openms_accuratemasssearch was updated to 40e0709178a5
- openms_baselinefilter was updated to 1936361a3dbb
- openms_baselinefilter was updated to d9a4d7684e66
- openms_clustermasstracesbyprecursor was updated to e58e7a1ce396
- openms_clustermasstracesbyprecursor was updated to f0682a468daa
- openms_cometadapter was updated to 2ffc94cb0766
- openms_cometadapter was updated to 67b02e52296a
- openms_compnovo was updated to 77d92924bb5a
- openms_compnovo was updated to ef622c891b92
- openms_compnovocid was updated to 3cb0c3a334f5
- openms_consensusmapnormalizer was updated to 226f58ac71c5
- openms_consensusmapnormalizer was updated to 8a205687e384
- openms_consensusmapnormalizer was updated to 9ff14d340f84
- openms_cruxadapter was updated to aed7aeb6feec
- openms_cvinspector was updated to 3b585b370ab8
- openms_cvinspector was updated to 53695d887eaa
- openms_cvinspector was updated to ae70a8086504
- openms_databasefilter was updated to 0c98acedb17a
- openms_databasefilter was updated to d589c931720d
- openms_databasefilter was updated to fd64bf34cb08
- openms_decharger was updated to 62cce3757d5b
- openms_decharger was updated to 95bf997c9cf5
- openms_decharger was updated to b7f550d1fa7e
- openms_decoydatabase was updated to 71a6c870aa48
- openms_demeanderize was updated to 37caa89b3ab1
- openms_demeanderize was updated to c64f929ec2bf
- openms_demeanderize was updated to d45d3394c1c9
- openms_eicextractor was updated to 0546885ddaf9
- openms_epifany was updated to 16cdef222ea2
- openms_externalcalibration was updated to 2a7feb3bf985
- openms_externalcalibration was updated to 4f6a44916c89
- openms_externalcalibration was updated to 61f5ad339398
- openms_falsediscoveryrate was updated to 100359fb8e7c
- openms_falsediscoveryrate was updated to 469690558892
- openms_falsediscoveryrate was updated to d07cd351f8ae
- openms_featurefinderidentification was updated to 5471eba33b70
- openms_featurefinderidentification was updated to 8bdf87119680
- openms_featurefinderidentification was updated to c1beeebc9db7
- openms_featurefinderisotopewavelet was updated to 4643d1a80309
- openms_featurefinderisotopewavelet was updated to b3881e7a2990
- openms_featurefinderisotopewavelet was updated to becf3642c634
- openms_featurefindermetabo was updated to 00080bb4299e
- openms_featurefindermetaboident was updated to 539b683e9752
- openms_featurefindermetaboident was updated to 59c8b1a9cf86
- openms_featurefindermetaboident was updated to 7e29bf457263
- openms_featurefindermrm was updated to 7407c66b08b4
- openms_featurefindermrm was updated to 9a9bbeefcd5d
- openms_featurefindermultiplex was updated to 5e5771b511a3
- openms_featurelinkerunlabeled was updated to 6b88274392ce
- openms_featurelinkerunlabeled was updated to a6e006df7659
- openms_featurelinkerunlabeled was updated to bf720ddf8333
- openms_featurelinkerunlabeledkd was updated to 7a9d97cfe93c
- openms_featurelinkerunlabeledqt was updated to 91f990434dc1
- openms_featurelinkerunlabeledqt was updated to bd07412009d1
- openms_featurelinkerunlabeledqt was updated to f1604a5673a3
- openms_ffeval was updated to 12513e823fd0
- openms_ffeval was updated to 6fb2f604537c
- openms_ffeval was updated to a02af506fe40
- openms_fidoadapter was updated to 39a1dd32a40d
- openms_fidoadapter was updated to b552ec8456e7
- openms_fidoadapter was updated to c3a5cd016963
- openms_fileconverter was updated to 62e19948b50f
- openms_fileconverter was updated to 9939af9b0ea3
- openms_filefilter was updated to acf2b5b25c75
- openms_filefilter was updated to c8c4aa72a49d
- openms_filefilter was updated to daec99595337
- openms_fileinfo was updated to 32264aaa27b8
- openms_fileinfo was updated to 98f171dab07c
- openms_fileinfo was updated to e8dce5e07fa5
- openms_filemerger was updated to 04e7a86378d5
- openms_filemerger was updated to 8b871a67ba56
- openms_gnpsexport was updated to 22885d201eb8
- openms_gnpsexport was updated to 2dabae2814df
- openms_gnpsexport was updated to d3cbea30faa4
- openms_highresprecursormasscorrector was updated to 829a9a4318c8
- openms_highresprecursormasscorrector was updated to 8962ca0b2456
- openms_highresprecursormasscorrector was updated to cdbd06d8cbd5
- openms_idconflictresolver was updated to 709b729227e9
- openms_idconflictresolver was updated to fb0e6f70a1df
- openms_idextractor was updated to 2a2fa2b57306
- openms_idfileconverter was updated to 250d6a43f66b
- openms_idfileconverter was updated to 43a1db77b7a6
- openms_idfileconverter was updated to 6772d71b9150
- openms_idmassaccuracy was updated to 65be0674bb70
- openms_idmassaccuracy was updated to f918cb7aefd5
- openms_idposteriorerrorprobability was updated to 18ee86db4af2
- openms_idposteriorerrorprobability was updated to 73d288112aef
- openms_idscoreswitcher was updated to ec0d05b20eed
- openms_idsplitter was updated to 50b4109ecac7
- openms_internalcalibration was updated to 4682dcff7e2f
- openms_internalcalibration was updated to cca2b6c3ae61
- openms_isobaricanalyzer was updated to 6eb4a1a41639
- openms_isobaricanalyzer was updated to d52e76ea2c11
- openms_lowmempeakpickerhiresrandomaccess was updated to 4cfd0b909d6e
- openms_lowmempeakpickerhiresrandomaccess was updated to cdfb3d535a73
- openms_mapaligneridentification was updated to 12ae09b3a0b4
- openms_mapaligneridentification was updated to bf50f9eb1dcb
- openms_mapalignerposeclustering was updated to d17db97d139f
- openms_mapalignerspectrum was updated to 051ded4b9e1f
- openms_mapalignertreeguided was updated to 25c08f95cdf4
- openms_mapalignertreeguided was updated to 4bdaddb03b67
- openms_mapalignertreeguided was updated to 759648882c3c
- openms_mapnormalizer was updated to 7d45a120519f
- openms_mapstatistics was updated to 05215884f6d0
- openms_mapstatistics was updated to 6530e5b0b966
- openms_mapstatistics was updated to 9e25560d4ded
- openms_mascotadapter was updated to 57fb2083a8cb
- openms_mascotadapter was updated to 6ff54b799207
- openms_mascotadapter was updated to fb751f9c050b
- openms_masscalculator was updated to 65c6e741ddf3
- openms_masstraceextractor was updated to 4e32bb5991e3
- openms_metaboliteadductdecharger was updated to 51203b9c8ef5
- openms_metaboliteadductdecharger was updated to 68e3317532cb
- openms_metaboliteadductdecharger was updated to ebc51eae71cd
- openms_mrmmapper was updated to 9a62bfe7661d
- openms_mrmmapper was updated to bc8e70bada0e
- openms_mrmmapper was updated to ecd19f3312fe
- openms_mrmpairfinder was updated to 482de0c17531
- openms_mrmpairfinder was updated to a040e1ed8736
- openms_mrmpairfinder was updated to f8ed4723376c
- openms_msfraggeradapter was updated to 52a0856534d9
- openms_msfraggeradapter was updated to 5a9c3e827da5
- openms_msfraggeradapter was updated to 6bcc338b9dc6
- openms_mssimulator was updated to 04228172e123
- openms_msstatsconverter was updated to e444b158fb20
- openms_multiplexresolver was updated to 381448b2db6d
- openms_multiplexresolver was updated to b3dcd2098472
- openms_multiplexresolver was updated to fb647b7cf2c1
- openms_myrimatchadapter was updated to 7b1dc8fbf6ab
- openms_myrimatchadapter was updated to b89d4041c578
- openms_myrimatchadapter was updated to d9512d2a688c
- openms_mztabexporter was updated to 9bf4fbcf20c8
- openms_mztabexporter was updated to c679f920716e
- openms_mztabexporter was updated to e270a5689e12
- openms_noisefiltergaussian was updated to 038c7525527e
- openms_noisefiltergaussian was updated to 43c3edaadb5d
- openms_noisefiltergaussian was updated to 4b6ea1de6dc4
- openms_noisefiltersgolay was updated to 1312f9119f74
- openms_noisefiltersgolay was updated to 6b555020d5f3
- openms_noisefiltersgolay was updated to f2834f001a80
- openms_novoradapter was updated to 562d46a2f8b6
- openms_novoradapter was updated to ea8f9d83f34f
- openms_omssaadapter was updated to 886991df53f7
- openms_openpepxl was updated to a2a842b00f9c
- openms_openpepxllf was updated to 04168c0bdfa7
- openms_openpepxllf was updated to a8c028751a74
- openms_openpepxllf was updated to e574d3f268f6
- openms_openswathanalyzer was updated to 4da16805dea6
- openms_openswathanalyzer was updated to 7ca917175b23
- openms_openswathanalyzer was updated to bc57c90ba60f
- openms_openswathassaygenerator was updated to 5848492bfc5a
- openms_openswathassaygenerator was updated to a41cd777ced9
- openms_openswathassaygenerator was updated to df72ca515420
- openms_openswathchromatogramextractor was updated to 71555764c24a
- openms_openswathconfidencescoring was updated to e8f64a7dc470
- openms_openswathconfidencescoring was updated to fa73919cc97e
- openms_openswathdecoygenerator was updated to 1814187218fe
- openms_openswathdecoygenerator was updated to 3769d3a7e9ba
- openms_openswathdecoygenerator was updated to 965413f29bf5
- openms_openswathfeaturexmltotsv was updated to 5368af178b30
- openms_openswathfeaturexmltotsv was updated to 5c50095229a5
- openms_openswathfeaturexmltotsv was updated to b8192a9b7f9c
- openms_openswathfilesplitter was updated to 40abe25cb21c
- openms_openswathmzmlfilecacher was updated to 28a6bc00f369
- openms_openswathmzmlfilecacher was updated to e7c43d17e3dc
- openms_openswathmzmlfilecacher was updated to fc775d5aa321
- openms_openswathrewritetofeaturexml was updated to 5ad2d341fb2f
- openms_openswathrtnormalizer was updated to 79dbeb3cbfb4
- openms_openswathrtnormalizer was updated to 7d73049c05c0
- openms_openswathrtnormalizer was updated to f25fbb8ff7cf
- openms_openswathworkflow was updated to 3967f7cf35b9
- openms_openswathworkflow was updated to 887be35bc42e
- openms_peakpickeriterative was updated to 0c37d0660a6b
- openms_peakpickeriterative was updated to 911e9dda3eb2
- openms_peakpickerwavelet was updated to 341af0b11af9
- openms_peakpickerwavelet was updated to 9e47c4855b18
- openms_pepnovoadapter was updated to 3bfc9aba4809
- openms_pepnovoadapter was updated to 5b1ccc4c4ab4
- openms_percolatoradapter was updated to 147aaac03456
- openms_percolatoradapter was updated to e7881a82b56d
- openms_phosphoscoring was updated to 4c583fde2a28
- openms_phosphoscoring was updated to 535b554505c6
- openms_phosphoscoring was updated to c04ff2777ed2
- openms_precursormasscorrector was updated to e15d84652dba
- openms_proteinresolver was updated to 95f90fab5ce8
- openms_qccalculator was updated to 044adca691a7
- openms_qccalculator was updated to 44856bd6bf27
- openms_qccalculator was updated to 8bcc0d2ad96e
- openms_qcembedder was updated to 2c6f5858e89a
- openms_qcextractor was updated to 3a54cf566e55
- openms_qcextractor was updated to 7468a1c8ca6e
- openms_qcextractor was updated to ef970936ce43
- openms_qcimporter was updated to 0cfaedd90c2b
- openms_qcimporter was updated to 83f22c5c5f92
- openms_qcimporter was updated to ddf8a08bbd91
- openms_qcshrinker was updated to 910f1fdf039a
- openms_qualitycontrol was updated to 2f08fa7ab72c
- openms_qualitycontrol was updated to 6d9cd32c941b
- openms_qualitycontrol was updated to e2f683fcd6bd
- openms_rnamasscalculator was updated to 1af5b39289b8
- openms_rnamasscalculator was updated to 4f8478024146
- openms_rnamasscalculator was updated to f8475273db10
- openms_rnpxlsearch was updated to 25cc460f9092
- openms_rnpxlsearch was updated to 3dc6d9795d5b
- openms_rnpxlsearch was updated to 7911914e96f6
- openms_rnpxlxicfilter was updated to c2827f0ca312
- openms_rnpxlxicfilter was updated to e7a97a131b5f
- openms_rtmodel was updated to 654e2bf18e82
- openms_rtmodel was updated to a9ece00a3e54
- openms_rtmodel was updated to de3eec8c9a17
- openms_seedlistgenerator was updated to 47ce7a087ec1
- openms_seedlistgenerator was updated to bff2e0548994
- openms_seedlistgenerator was updated to f840d8e8099a
- openms_sequencecoveragecalculator was updated to 01e5bd3ad317
- openms_sequencecoveragecalculator was updated to 47ad03766bd8
- openms_sequencecoveragecalculator was updated to 7cfb36b97c87
- openms_simplesearchengine was updated to 047d6bdf5c9f
- openms_simplesearchengine was updated to 1b56031ac321
- openms_simplesearchengine was updated to e42e8b553f7d
- openms_siriusadapter was updated to 01731de4b735
- openms_siriusadapter was updated to 1a6f39227aca
- openms_siriusadapter was updated to ac6f09817679
- openms_speclibcreator was updated to 15f9084434c0
- openms_speclibcreator was updated to 5d837ca93d0e
- openms_speclibcreator was updated to 70105532a580
- openms_speclibsearcher was updated to 531935403142
- openms_speclibsearcher was updated to 69489bd3426b
- openms_speclibsearcher was updated to 863a35a84426
- openms_spectrafiltermarkermower was updated to 96fad29730dd
- openms_spectrafiltermarkermower was updated to b210cea1b4f6
- openms_spectrafilterscaler was updated to e27862d4e69f
- openms_spectrafiltersqrtmower was updated to 886dff8ca0cb
- openms_spectrastsearchadapter was updated to 27ddea86fe90
- openms_spectrastsearchadapter was updated to 28e96ae21a44
- openms_spectrastsearchadapter was updated to 7e2e9379aec7
- openms_svmtheoreticalspectrumgeneratortrainer was updated to 416fc18f347a
- openms_svmtheoreticalspectrumgeneratortrainer was updated to 94b81345543d
- openms_svmtheoreticalspectrumgeneratortrainer was updated to b1a8601e2ea0
- openms_targetedfileconverter was updated to 51b9c2d5b4c3
- openms_targetedfileconverter was updated to 6562463bf496
- openms_targetedfileconverter was updated to aa62f8f48dd4
- openms_textexporter was updated to 1c596fdaf34a
- openms_tofcalibration was updated to 90f459a4da0e
- openms_transformationevaluation was updated to 24d0298006e1
- openms_xfdr was updated to 81402a5e4173
- openms_xfdr was updated to 9a6e3bb0f358
- openms_xmlvalidator was updated to 75bb0f81cfa3
- openms_xmlvalidator was updated to 8d2e828561d6
Nanopore
- medaka_consensus was updated to 5901bb391198
- medaka_consensus_pipeline was updated to a1b70f038b4a
- medaka_variant was updated to 2308bc523659
- medaka_variant_pipeline was updated to 5c959a2dde5f
deepTools
- deeptools_estimatereadfiltering was updated to 71082dac170c
Metabolomics
- dimspy_merge_peaklists was updated to 50ec7a43cb62
Data Managers
- data_manager_dada2 was updated to bf7b2c14cabc
- data_manager_primer_scheme_bedfiles was updated to b3710e492ee4
- data_manager_primer_scheme_bedfiles was updated to cce5d9327cd6
- data_manager_salmon_index_builder was updated to 57274fe5e01a