UseGalaxy.eu Tool Updates for 2022-08-28
On 2022-08-28, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #345
Assembly
- rnaspades was updated to 1d06c8b38e77
- spades_biosyntheticspades was updated to 051fd2db8a27
- spades_coronaspades was updated to 34305b013402
- spades_metaplasmidspades was updated to e5a3b75a271f
- spades_metaviralspades was updated to 328aa71f0f3c
- spades_plasmidspades was updated to 1708851f8804
- spades_rnaviralspades was updated to d5fb354f745d
- metaspades was updated to fd128c111ab0
- spades was updated to 33368fec3b70
RNA Analysis
- circexplorer2 was updated to 465d6578b4d0
- deseq2 was updated to 8fe98f7094de
Proteomics
- openms_openpepxl was updated to a2a842b00f9c
- openms_percolatoradapter was updated to 0fc9ae55bcfc
- openms_percolatoradapter was updated to e7881a82b56d
- openms_xfdr was updated to 81402a5e4173
- openms_xfdr was updated to 9a6e3bb0f358
Metagenomic Analysis
- bracken was updated to 79450f7fd718
- megan_blast2rma was updated to 45fd617493eb
- megan_daa2rma was updated to 8a9cad43dcde
- megan_daa_meganizer was updated to 6ca88053665c
- megan_sam2rma was updated to ef0443c0eaba
- recentrifuge was updated to fe733f05c2f8
- srst2 was updated to f9a0855c792d
Single-cell
- raceid_clustering was updated to 0bff0ee0683a
- raceid_filtnormconf was updated to b83fbc90161e
- raceid_inspectclusters was updated to f3eb2291da05
- raceid_inspecttrajectory was updated to a6821f856a1e
- raceid_trajectory was updated to 2af7c5086a96
Variant Calling
- gatk4_mutect2 was updated to fb0bb7174530
Get Data
- ncbi_datasets was updated to 18eed8fa7f23
Annotation
- gubbins was updated to 96e6283e4745
Picard
- picard was updated to b502c227b5e6