Workshop on high-throughput sequencing data analysis with Galaxy
This course introduces scientists to the data analysis platform Galaxy. The course is a beginner course; there is no requirement of any programming skills.
General information
- Date: June 17-21, 2024
- Format: on-site
- Location: Schänzlestrasse 1, 79104 Freiburg
- Time: 9:15am-5pm CEST
- Cost: Free
- Contact: Anika Erxleben-Eggenhofer (erxleben@informatik.uni-freiburg.de)
Pedagogical information
Target Audience: Scientist with no or little Galaxy experience who want to analyse sequencing data.
Learning Objectives:
- To get introduced to Galaxy as data analysis platform and the GTN training material
- To learn how to use use tools and databases in Galaxy
- To be able to run different tools and workflows
Training material: For the hands-on course, we will use the training material from the Galaxy Training Network.
Preliminary schedule (can be adjusted to the demand of the participants)
| Day | Start | End | Session | Instructors |
|---|---|---|---|---|
| June 17th | 9:15am | 4pm | Welcome - Galaxy introduction - Quality control | |
| June 18th | 9:15am | 5pm | ChIP-Sequencing | |
| June 19th | 9:15am | 5pm | RNA-Sequencing | |
| June 20th | 9:15am | 5pm | Variant Calling/Exome Seqencing | |
| June 21st | 9:15am | 4pm | Metagenomics/ Foodborne |
Registration
The number of places in this workshop is limited. The course takes place only in person (not online, not hybrid). There are no fees for the workshop but you need to care for your accommodation, travel costs and catering by yourself.
Please apply here with this form for a spot in the workshop. Participants will be informed about their selection until end of April 2024.
If you have further questions, please contact Anika Erxleben-Eggenhofer (erxleben@informatik.uni-freiburg.de)
Supporters
This event is generously supported by DataPLANT, EuroScienceGateway and de.NBI.
