Galaxy Freiburg
The homepage of the Freiburg Galaxy community
Galaxy is an open-source platform for FAIR data analysis that enables users to:
- use tools from various domains (that can be plugged into workflows) through its graphical web interface.
- run code in interactive environments (RStudio, Jupyter...) along with other tools or workflows.
- manage data by sharing and publishing results, workflows, and visualizations.
- ensure reproducibility by capturing the necessary information to repeat and understand data analyses.
The Galaxy Community is actively involved in helping the ecosystem improve and sharing scientific discoveries.
News
BellaVista interactive tool now available in Galaxy
Open-Source Visualization for Imaging-Based Spatial Transcriptomics
Know How Sciensano harnesses Galaxy for Advanced Microbial Genomics, Precision Typing, and Rapid Outbreak Detection
The BioImage Model Zoo meets the Galaxy platform
New tool to run AI models for image analysis
Galaxy Admin Training Interest Survey
ELIXIR Europe and the Galaxy Community are looking to host a Galaxy Admin Training in 2025
Survey about a week-long Galaxy Admin Training in Europe
🚀 Survey about a week-long Galaxy Admin Training in Europe 🇪🇺
Events
Apr 27 - May 1European Geosciences Union (EGU) 2025
A FAIR-EASE session to the European Geoscience Union
May 8Galaxy Europe presents at the “Data Snacks” Series – Presentation by Dr. Sanjay Kumar Srikakulam
Discover how Galaxy simplifies data analysis and management across scientific fields during the next Data Snacks session!
May 12 - May 16Galaxy Training Academy 2025
The Galaxy Training Academy is a self-paced online training event for beginners and advanced learners who want to improve their Galaxy data analysis skills. Over the course of one week, we offer a diverse selection of learning track for you.
May 13Tools Platform and Single Cell Omics: 'Bring Your Workflow' to WorkflowHub
Discover how to make your workflows FAIR, citable, and shareable at this hands-on ELIXIR event with WorkflowHub and Single Cell Omics experts.
Our services
The Freiburg Galaxy Team is offering several services to enable reproducible and accessible research for everyone:
Training
We regularly provide workshops.
But we cannot always meet capacity, so we've put all of our training materials online. This has become a community project with people from all over the world contributing training materials.
Topics include: variant analysis, transcriptomics, metagenomics, epigenetics, and many more!
Acknowledgements
We are aiming to maintain high competency and provide high-quality data analysis services to all our Galaxy users.
Therefore, we request that you acknowledge this service by including the members of the Freiburg Galaxy Team as co-authors if they have made a significant intellectual and/or organizational contribution to the work described (conceptualization, design, data analysis, data interpretation and/or input into drafting, revising or writing any portion of the manuscript).
Individuals who have contributed to the project, but whose contributions do not rise to the level justifying authorship, can be recognized in the acknowledgements section of the manuscript as follows:
The authors acknowledge the support of the Freiburg Galaxy Team: Person X and Prof. Rolf Backofen, Bioinformatics, University of Freiburg, Germany funded by Collaborative Research Centre 992 Medical Epigenetics (DFG grant SFB 992/1 2012) and the German Federal Ministry of Education and Research (BMBF grant 031 A538A de.NBI-RBC).
Additional funding of projects and/or provision of material expenses are welcome as well, to help support our growing Galaxy community in Freiburg.