How to use Galaxy

How to cite Galaxy

Citing Galaxy

If you use Galaxy@Pasteur please cite doi:10.7490/f1000research.1114334.1

Cluster Load

test

For pasteur users:

  • Instructions on how to import big data here.
  • Galaxy Initiation slides are available here.
  • If you need a new tool or a new genome index for an existing tool (bwa, blast, star...), send an email to Pasteur_galaxy_support.

Warning! When xml are updated, workflows using them must be adapted.

News

Paper Highlight: “Hydrogen Radical Chemistry at High-Symmetry {2Fe2S} Centers Probed Using a Muonium Surrogate”

New Paper "Guidance framework to apply best practices in ecological data analysis: lessons learned from building Galaxy-Ecology"

We are excited to share our recent publication in GigaScience. This paper presents a practical framework aimed at improving transparency, reproducibility, and efficiency in ecological research by leveraging the Galaxy-Ecology platform.​

Galaxy meets Onedata — distributed storage for science

Galaxy now features comprehensive integration with Onedata — a distributed data management platform. Users gain more options regarding their data sources (Bring Your Own Data) and storage locations (Bring Your Own Storage).

Galaxy at the E-Science Days 2025 in Heidelberg

We are presenting Galaxy's applicability for the Humanities

New Paper "Clouds influence the functioning of airborne microorganisms"

Péguilhan et al. have collaborated with Dr. Bérénice Batut and Engy Nasr and used Galaxy for Cloud and Clear skys data analysis in their newly published paper

Events

Apr 1Galaxy Community Board Meeting: 🪑GCB

Apr 8Single-cell & sPatial Omics Community Meeting: 🖖🏾SPOC

Apr 17Small Scale Galaxy Admins Meeting

Apr 22Galaxy Imaging Hackathon 2025

Apr 27 - May 1European Geosciences Union (EGU) 2025

A FAIR-EASE session to the European Geoscience Union