How to use Galaxy

How to cite Galaxy

Citing Galaxy

If you use Galaxy@Pasteur please cite doi:10.7490/f1000research.1114334.1

Cluster Load

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For pasteur users:

  • Instructions on how to import big data here.
  • Galaxy Initiation slides are available here.
  • If you need a new tool or a new genome index for an existing tool (bwa, blast, star...), send an email to Pasteur_galaxy_support.

Warning! When xml are updated, workflows using them must be adapted.

News

New Paper "Integrative meta-omics in Galaxy and beyond"

Schiml et al. present three integrative meta-omics workflows, developed in Galaxy, for enhanced analysis and integration of metagenomics, metatranscriptomics, and metaproteomics, combined with a newly developed web-application, ViMO (Visualizer for Meta-Omics) to analyse metabolisms in complex microbial communities.

Time to celebrate!

Galaxy having grown up and matured - happy 18th birthday!

1st BioNT Training workshop - A practical introduction to bioinformatics and RNA-seq using Galaxy

BioNT delivered its first training workshop, A practical introduction to bioinformatics and RNA-seq using Galaxy, from 4th to 8th of September, 2023. This post reports this workshop's organisation, the applicants and participants, as well as their feedback about it.

Galaxy admin training

Galaxy Admin Training from April 17th to 21st in Ghent, Belgium.

Connecting Astronomical Data Archives with Galaxy

Enabling astronomers to search and download data from IVOA-compliant archives directly within Galaxy

Events

Oct 4 - Oct 6European Galaxy Days (EGD)

European Galaxy Community meeting in Autumn

Oct 4microGalaxy Community Call

microGalaxy is a communities of practice focusing on microbial data analysis with Galaxy

Oct 9 - Oct 13Workshop on Single-cell Data Analysis with Galaxy

In this workshop, scientists learn single-cell data analysis using Galaxy. There is no requirement of any programming skills.