How to use Galaxy

How to cite Galaxy

Citing Galaxy

If you use Galaxy@Pasteur please cite doi:10.7490/f1000research.1114334.1

Cluster Load

test

For pasteur users:

  • Instructions on how to import big data here.
  • Galaxy Initiation slides are available here.
  • If you need a new tool or a new genome index for an existing tool (bwa, blast, star...), send an email to Pasteur_galaxy_support.

Warning! When xml are updated, workflows using them must be adapted.

News

We are striking!

usegalaxy.eu closes job-queue on September 20th to support climate strike

Galaxy in Research: Uncovering the evolutionary secrets of wild loquats using comparative chloroplast genomics

A new study has sequenced and analyzed two wild loquat chloroplast genomes, revealing key insights into their evolutionary history and the genetic diversity of loquat species.

Hosting R/Shiny applications on Galaxy (and other frameworks)

Thanks to the outcome of a small Galaxy/Bioconductor hackathon earlier this year, it has become much easier to deploy Shiny applications as interactive tools (ITs) on usegalaxy.eu

Opinion: Conda, Anaconda and the much bigger problem behind it

Anaconda, DockerHub, Quay.io, GitHub ... we need to talk about the sustainability of our infrastructure.

Galaxy in Research: Advancing quantum materials research with Galaxy

At Oak Ridge National Laboratory, scientists have harnessed the power of Galaxy to bring together cutting-edge computing resources, paving the way for new discoveries in quantum materials through advanced neutron scattering data analysis.

Events

Oct 7 - Oct 11Galaxy Training Academy 2024

Are you ready to enhance your data analysis skills? The Galaxy Training Academy is a five-day global online event designed for beginners and those looking to enhance their Galaxy expertise.

Oct 8 - Oct 10Gateways 2024

Help bridge the connection between science and gateways, such as Galaxy.

Oct 21 - Oct 23EOSC Symposium

EOSC Symposium 2024 invites all EOSC projects. It will take place under the patronage of the German Minister for Education and Research Bettina Stark-Watzinger. The event is being organised by the EOSC Association, the EOSC-A German Mandated Organisation, NFDI, the ZBW – Leibniz Information Centre for Economics, an EOSC-A Member, and with the support of the Horizon Europe project EOSC Focus. The Galaxy Project will join as core pillar of the EU-funded EOSC EuroScienceGateway project.

Nov 13 - Nov 16Biological Data Science

The scope of this meeting will be the infrastructure, software, and algorithms needed to analyze large data sets in biological research.