How to use Galaxy

How to cite Galaxy

Citing Galaxy

If you use Galaxy@Pasteur please cite doi:10.7490/f1000research.1114334.1

Cluster Load

test

For pasteur users:

  • Instructions on how to import big data here.
  • Galaxy Initiation slides are available here.
  • If you need a new tool or a new genome index for an existing tool (bwa, blast, star...), send an email to Pasteur_galaxy_support.

Warning! When xml are updated, workflows using them must be adapted.

News

CellProfiler now available in Galaxy as an interactive tool too

Use CellProfiler as if you were working in your local workstation

Initial EuroScienceGateway workflows published in WorkflowHub

Workflows covering astronomy, biodiversity, earth science and genomics published in WorkflowHub together with onboarding guide

FOSDEM 2024: How Galaxy democratizes data analysis

Galaxy Europe at the Free and Open Source Developers’ European Meeting in Brussels 🍟

Molecular Biology of Plants conference (MBP 2024)

Poster Presentation entitled MAdLand Tools & Resources

Events

Mar 4 - Mar 8Workshop on High-Throughput Data Analysis with Galaxy

This course introduces scientists to the data analysis platform Galaxy. The course is a beginner course; there is no requirement of any programming skills.

Mar 5 - Mar 6Awareness in Data Management and Analysis for Industry and Research

Join us at BioNT, for a 2-day online workshop. Everyone manages their data, but the question is, how well? In this two-day workshop, you will learn how to manage your data properly to make it reusable in the long term, to make your analyses reproducible, and to make your processes transparent. You will learn the basic concepts of research data management, including the FAIR Data Principles. You will also learn about relevant policies, draft a data management plan and learn about the use and benefits of electronic lab notebooks. By the end of this workshop, you will also be able to make your computational results trustworthy and reproducible. Registarion deadline is extended until the 25.02.2024.

Mar 11 - Mar 15Hackathon - Improving the annotation of Galaxy resources for microbial data analysis and beyond

This hackathon aims to improve the annotation of Galaxy resources for microbial data analysis and beyond

May 7 - May 11Biology of Genomes

The 2024 meeting will address DNA sequence variation and its role in molecular evolution, population genetics, complex diseases, comparative genomics, large-scale studies of gene and protein expression, and genomic approaches to ecological systems.