Galaxy ELIXIR-FR/IFB
Galaxy resources and news from ELIXIR France / IFB
Galaxy is an open-source platform for FAIR data analysis that enables users to:
- use tools from various domains (that can be plugged into workflows) through its graphical web interface.
- run code in interactive environments (RStudio, Jupyter…) along with other tools or workflows.
- manage data by sharing and publishing results, workflows, and visualizations.
- ensure reproducibility by capturing the necessary information to repeat and understand data analyses.
The Galaxy Community is actively involved in helping the ecosystem improve and sharing scientific discoveries.
The French Galaxy server
The French Galaxy server UseGalaxy.fr is maintained by IFB NNCR Cluster Task force. Please check our Terms of Use and data retention policy before using the server. We offer thousands of tools, increased quota on temporary basis, and compute infrastructure for trainers through Training Infrastructure as a Service (TIaaS).
The following regional platforms, members of IFB, are involved in the maintenance and development of UseGalaxy.fr:
Training
If you are organising a training session, you can book computing resources using the TIaaS system
GalaxyCat
Can't find a tool on usegalaxy.fr? Why not search on the IFB Galaxy Catalog ?
Communities: domain-centric Galaxy subdomains
Microbiology
Whether you're working with microbiome samples or bacterial isolates, long or short reads, shotgun or 16S sequencing, genomics, transcriptomics, proteomics, metabolomics, or integrative multi-omics analysis—this is the place for you!
Single-cell
Access Single Cell Omics analysis tutorials, tools, and workflows that let you analyse data without programming experience or private infrastructure.
Workflow4Metabolomics
Data processing, analysis and annotation for the metabolomics community
Metabarcoding
With the following tools and pipelines: FROGS, QIIME, Mothur, Obitools, dada2, PICRUSt
Upcoming Events
View all →ESG4Stars kick-off meeting
The 2nd Galaxy Tool Development Workshop - Now Open to the wider Community!
Galaxy Beyond Basics: Mastering Workflows, Automation, and Scalability
Small Scale Galaxy Admins Meeting
Galaxy and AI in small subjects
Recent News
View all →BioFAIR Data to Discovery Single-Cell Training and CoFest
microGalaxy Hackathon for Tool Development
New Publication "Bioimage management and analysis in Galaxy: Tools, workflows, training, and community practices"
Connecting CKAN and Galaxy: from data repositories to analysis and back
Last Few Spots left - Galaxy Tool Development Workshop, Registration Closes 14 September
Quick Links
Welcome to the Galaxy Instance of IFB - usegalaxy.fr - Hosted by the IFB Core Cluster.