Galaxy is an open-source platform for FAIR data analysis that enables users to:

  • use tools from various domains (that can be plugged into workflows) through its graphical web interface.
  • run code in interactive environments (RStudio, Jupyter...) along with other tools or workflows.
  • manage data by sharing and publishing results, workflows, and visualizations.
  • ensure reproducibility by capturing the necessary information to repeat and understand data analyses.

The Galaxy Community is actively involved in helping the ecosystem improve and sharing scientific discoveries.

The French Galaxy server

The French Galaxy server UseGalaxy.fr is maintained by IFB NNCR Cluster Task force. Please check our Terms of Use and data retention policy before using the server. We offer thousands of tools, increased quota on temporary basis, and compute infrastructure for trainers through Training Infrastructure as a Service (TIaaS).

The following regional platforms, members of IFB, are involved in the maintenance and development of UseGalaxy.fr:

Contact

Ask for help, tools, or temporary increase of quota on our support forum

Training

If you are organising a training session, you can book computing resources using the TIaaS system

GalaxyCat

Can't find a tool on usegalaxy.fr? Why not search on the IFB Galaxy Catalog ?

Citation

Have you used the French Galaxy server for your data analysis?



Team

The French Galaxy team is distributed across different cities in France.



Communities: domain-centric Galaxy subdomains

Workflow4Metabolomics

Data processing, analysis and annotation for the metabolomics community

ProteoRE

Functional analysis and exploration of proteomics and transcriptomics data in biomedical research

Covid19

Variant analysis, consensus using communuty approuved workflows and datasets

Metabarcoding

With the following tools and pipelines : FROGS, Qiime, Mothur, Obitools, DADA2, PICRUSt

Met4J

Open-source Java library dedicated to the structural analysis of metabolic networks

MNHN

Tools from the French Muséum National d'Histoire Naturelle

News

We are striking!

usegalaxy.eu closes job-queue on February 14th to support climate strike

Galaxy Release 24.2

Check out the newest features and updates on Galaxy!

TabPFN: Foundation Model for Tabular Data in Galaxy

Fast machine learning method for making predictions on any tabular data

GBCC2025 Logo Contest Winner

The winner of the GBCC2025 Logo Contest is here!

EuroScienceGateway Project: Testing the deployment of Galaxy and Pulsar on the EOSC EU Node

Deploy your own Galaxy and Pulsar instances on the EOSC EU Node

Events

Feb 27Research Data Management with RSpace and Galaxy - Talk and Q&A

Discover how RSpace's open-source solutions promote innovation and collaboration in research data management (RDM).

Mar 10 - Mar 14Workshop on high-throughput sequencing data analysis with Galaxy

This course introduces scientists to the data analysis platform Galaxy. The course is a beginner course; there is no requirement of any programming skills.