Galaxy is an open-source platform for FAIR data analysis that enables users to:
- use tools from various domains (that can be plugged into workflows) through its graphical web interface.
- run code in interactive environments (RStudio, Jupyter...) along with other tools or workflows.
- manage data by sharing and publishing results, workflows, and visualizations.
- ensure reproducibility by capturing the necessary information to repeat and understand data analyses.
The Galaxy Community is actively involved in helping the ecosystem improve and sharing scientific discoveries.
BioNT delivered its first training workshop, A practical introduction to bioinformatics and RNA-seq using Galaxy, from 4th to 8th of September, 2023. This post reports this workshop's organisation, the applicants and participants, as well as their feedback about it.
Galaxy having grown up and matured - happy 18th birthday!
Schiml et al. present three integrative meta-omics workflows, developed in Galaxy, for enhanced analysis and integration of metagenomics, metatranscriptomics, and metaproteomics, combined with a newly developed web-application, ViMO (Visualizer for Meta-Omics) to analyse metabolisms in complex microbial communities.
Galaxy Admin Training from April 17th to 21st in Ghent, Belgium.
Enabling astronomers to search and download data from IVOA-compliant archives directly within Galaxy
Oct 4 - Oct 6European Galaxy Days (EGD)
European Galaxy Community meeting in Autumn
microGalaxy is a communities of practice focusing on microbial data analysis with Galaxy
Oct 9 - Oct 13Workshop on Single-cell Data Analysis with Galaxy
In this workshop, scientists learn single-cell data analysis using Galaxy. There is no requirement of any programming skills.
The thematic dedicated to metabolomics data processing, analysis and annotation for Metabolomics community
The thematic for functional analysis and exploration of proteomics and transcriptomics data in biomedical research
We regularly provide workshops.
But we cannot always meet capacity, so we've put all of our training materials online. This has become a community project with people from all over the world contributing training materials.
Topics include: variant analysis, transcriptomics, metagenomics, epigenetics, and many more!
Ask the GalaxyCat
Can't find a tool on usegalaxy.fr?
Why not search on the IFB Galaxy Catalog ?