UseGalaxy.eu Tool Updates for 2021-10-30
On 2021-10-30, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #297
Send Data
- ena_upload was updated to e1b3b37aa69f
Nanopore
- ont_fast5_api_compress_fast5 was updated to 82c6009bc120
- ont_fast5_api_fast5_subset was updated to 0defe443ea04
- ont_fast5_api_multi_to_single_fast5 was updated to f98c015cebd8
- ont_fast5_api_single_to_multi_fast5 was updated to 435344af6dc9
Graph/Display Data
- ggplot2_heatmap was updated to 391a4cc45fea
- ggplot2_histogram was updated to 1f0242e49a58
- ggplot2_histogram was updated to 398e5104f8a2
- ggplot2_pca was updated to 1b9406a1a769
- ggplot2_pca was updated to 7e616a1bdb07
- ggplot2_point was updated to 87908c76ca8d
- ggplot2_point was updated to e3a675da7fd0
- ggplot2_violin was updated to 3a270cee1239
- ggplot2_violin was updated to dfd5d981b5a4
Convert Formats
- bioext_bam2msa was updated to 27202050e185
- biom_convert was updated to 54ccb7e1f49a
Mapping
- bioext_bealign was updated to c239e93d9f04
FASTA/FASTQ
- umi_tools_count was updated to 24013bf85a6f
- umi_tools_dedup was updated to aa9a4233c641
- umi_tools_extract was updated to 7accf7407811
- umi_tools_group was updated to 1263189f6204
- umi_tools_whitelist was updated to 81bebc3027fc
Assembly
- miniasm was updated to 80d1250bd5fd
Annotation
- hamronize_summarize was updated to a84e3131ae6a
- hamronize_tool was updated to ec82fac4eb4b
ChemicalToolBox
- gmx_editconf was updated to 8be9cb12a4fa
- gmx_em was updated to 59c662ca4211
- gmx_energy was updated to 97872d87ba80
- gmx_makendx was updated to 5f9f51642a24
- gmx_merge_topology_files was updated to 534ff13ea227
- gmx_restraints was updated to 54eadeb47ab9
- gmx_setup was updated to 8ad46f918541
- gmx_sim was updated to 525ca7c8065f
- gmx_solvate was updated to 61094e01eff9
- gmx_trj was updated to b4705476229d
Proteomics
- openms_openpepxl was updated to a2a842b00f9c
- openms_percolatoradapter was updated to 0fc9ae55bcfc
- openms_percolatoradapter was updated to e7881a82b56d
- openms_xfdr was updated to 81402a5e4173
- openms_xfdr was updated to 9a6e3bb0f358
hca_sc_scanpy_tools
- anndata_ops was updated to a36d7a315be7
- scanpy_compute_graph was updated to a58d4166805b
- scanpy_filter_cells was updated to 4c42e5d8cb7c
- scanpy_filter_genes was updated to 7857ea93a011
- scanpy_find_cluster was updated to 35caf3c27c91
- scanpy_find_markers was updated to eb01a7e59e9a
- scanpy_find_variable_genes was updated to 0edb75c411a4
- scanpy_integrate_bbknn was updated to 6e903e287858
- scanpy_integrate_combat was updated to 9f995f5e855a
- scanpy_integrate_harmony was updated to ca0c7251e415
- scanpy_integrate_mnn was updated to 94697510d55f
- scanpy_normalise_data was updated to 439f7f939d46
- scanpy_parameter_iterator was updated to 0387a2179f88
- scanpy_plot_embed was updated to 99dd7baf9e23
- scanpy_plot_trajectory was updated to 629ed290bf30
- scanpy_read_10x was updated to 30a139b5fcfb
- scanpy_regress_variable was updated to 2cf10c8c094d
- scanpy_run_diffmap was updated to 7abe27a3866e
- scanpy_run_dpt was updated to 5c54f3eb81d3
- scanpy_run_fdg was updated to 5bcec1fc4c7f
- scanpy_run_paga was updated to 9dcd0b02d686
- scanpy_run_pca was updated to ce93e630b55a
- scanpy_run_tsne was updated to 8eff7ec034e3
- scanpy_run_umap was updated to 0f98603d0116
- scanpy_scale_data was updated to c6e52529260e
Metabolomics
- isoplot was updated to dd3e046a72ad