UseGalaxy.eu Tool Updates for 2022-07-03
On 2022-07-03, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #334
Join, Subtract and Group
- datamash_ops was updated to 746e8e4bf929
- datamash_reverse was updated to f198773344e4
- datamash_transpose was updated to ac092723240d
Proteomics
- openms_openpepxl was updated to a2a842b00f9c
- openms_percolatoradapter was updated to 0fc9ae55bcfc
- openms_percolatoradapter was updated to e7881a82b56d
- openms_semanticvalidator was updated to b60c5420dac6
- openms_xfdr was updated to 81402a5e4173
- openms_xfdr was updated to 9a6e3bb0f358
hca_sc_scanpy_tools
- scanpy_find_markers was updated to af5e4efa9e66
Metagenomic Analysis
- concoct was updated to 7a145c72d375
- concoct_coverage_table was updated to 052e6bc06ea3
- concoct_cut_up_fasta was updated to 137ede2b48c0
- concoct_extract_fasta_bins was updated to 92a2d9109528
- concoct_merge_cut_up_clustering was updated to ce1a3ce0e807
- das_tool was updated to a8e434ebe961
- drep_compare was updated to 54aa421c2911
- drep_dereplicate was updated to 368cb4bef9d8
- fasta_to_contig2bin was updated to 5033d753964b
- recentrifuge was updated to 09b7b0b2e2c2
Variant Calling
- delly_call was updated to c34eab9d5134
- delly_classify was updated to df4300f300e4
- delly_cnv was updated to 8ad49c4272ea
- delly_filter was updated to 74f9f312c713
- delly_lr was updated to 7bd397ff21a2
- delly_merge was updated to 6c44bbc0eaa5
- ensembl_vep was updated to 27fd1c1f00a8
- vcf2maf was updated to 2973994fecd6
Nanopore
- medaka_consensus was updated to d6cddc06aeae
- medaka_consensus_pipeline was updated to cb34f00cc10f
- medaka_variant was updated to cc36773a3681
- medaka_variant_pipeline was updated to 1d62240feff3
Assembly
- yahs was updated to d87433f2a54d
None
- data_manager_build_kraken2_database was updated to 9002633b4737
Annotation
- annotatemyids was updated to 4f2967b27e67