Pasteur Event Horizon

events

Upcoming (and past) events with content relevant to the Pasteur Galaxy community. For events prior to this year, see the events archive.

If you know of any event that should be added to this page and/or to the Galaxy Event Calendar, please add it to the GitHub repository or submit it through this form.

Upcoming Events

DateTopic/EventVenue/LocationContact
31 October 2022Analysis of biological data with Galaxy

Learn how to use Galaxy in YOUR research

Penn State University Park Campus, Wartik Building, Room 501 Greg Von Kuster and Anton Nekrutenko
6 February 2023

Participants will be guided through the droplet-based scRNA-seq analysis pipelines from raw reads to trajectories.

Online, EMBL-EBI, Hinxton, United Kingdom Jane Reynolds
25 April 2023

This 1.5-day course will give a general introduction on the galaxy web-page structure, how to import data, run tools, share analyses and build workflows. Participants will run a whole NGS analysis using an RNA-seq dataset as an example.

Bern SwitzerlandTraining offered by GTN Member Lucille Delisle, Hans-Rudolf Hotz

Recent Events

Events in the past 12 months:

DateTopic/EventVenue/LocationContact
17 November 2022Galaxy Community Call: The new GTN course builder

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Helena Rasche & Saskia Hiltemann
7 November 2022Galaxy @ BioHackathon-Europe 2022

BioHackathon activities are driven by practical sessions where people gather, discuss, and implement ideas and projects during intensive and productive coding sessions

Paris + Online, France Project organizers
27 October 2022Galaxy Community Call: Galaxy Release Process: Overview and Coming Changes

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Dannon Baker
14 October 2022

Image analysis using Galaxy

Beatriz Serrano-Solano, Björn Grüning
13 October 2022Galaxy Community Call: Muon Science community

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Eli Chadwick
3 October 2022

online Melanie Foell
3 October 2022

Online video tutorials about the use of cloud computing resources for MS-based proteomics.

Online Melanie Foell
3 October 2022European Galaxy Days (EGD)

European Galaxy Community meeting in Autumn

Freiburg, Germany Hans-Rudolf Hotz, Björn Grüning, Beatriz Serrano-Solano, Oana Marchis, Anika Erxleben
29 September 2022Galaxy Community Call: Workflows, Planemo, BioBlend and tags to automate SARS-CoV-2 genome surveillance

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Wolfgang Maier
15 September 2022Galaxy Community Call: Tool Search “Past, Present, and Future”

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Michelle Savage, Ahmed Awan, Tyler Collins
1 September 2022CANCELLED: Galaxy Community Call: Galaxy Release Process: Overview and Coming Changes

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Dannon Baker
18 August 2022Galaxy Community Call: Outcomes of the Outreachy projects

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Outreachy mentors & interns
4 August 2022Galaxy Community Call: Machine Learning Toolkit in Galaxy

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Kaivan Kamali
25 July 2022

This course will introduce you to SARS-CoV-2 bioinformatics pipelines. Learn how to use the web-based tool Galaxy for bioinformatics analyses, including how to input and process data, build a pipeline, and use existing workflows.

Online, Mexico, South Africa, Sydney, UK, India Carolina Castañeda Garcia, Claudine Nkera-Gutabara, Tanya Golubchik, Tracey Calvert-Joshua, Varun Shamanna
16 July 2022

The annual gathering of the Galaxy Community

University of Minnesota, Minneapolis, Minnesota, United StatesTraining offered by GTN Member Organizers
7 July 2022Galaxy Community Call: JupyterLab interactive tool

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Anup Kumar
5 July 2022

KU Leuven, Belgium Kaivan Kamali, Nate Coraor, Marius van den Beek, John Chilton, Anton Nekrutenko
5 July 2022

iRODS 2022 User Group Meeting

KU Leuven, Belgium Kaivan Kamali, Nate Coraor, Marius van den Beek, John Chilton, Anton Nekrutenko
23 June 2022Galaxy Community Call: Release 22.05

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global John Davis, Marius van den Beek
13 June 2022

Applications close 8 March

EMBL-EBI, Online, Hinxton, United Kingdom Organizers
9 June 2022Galaxy Community Call: Automatic updates of Galaxy tools and workflows

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Simon Bray
9 June 2022

Talk at the ELIXIR All Hands 2022

ELIXIR All Hands 2022, Amsterdam, Europe Beatriz Serrano-Solano
9 June 2022

Talk at the ELIXIR All Hands 2022

ELIXIR All Hands 2022, Amsterdam, Europe Björn Grüning
9 June 2022

Workshop at the ELIXIR All Hands 2022

ELIXIR All Hands 2022, Amsterdam, Europe Johan Gustafsson, Steven Manos, Nigel Ward, Andrew Lonie, Brian Davis, Sarah Beecroft, Carole Goble, Finn Bacall, Nicola Soranzo, Bjӧrn Grüning, Herve Menager, Hans Ienasescu
9 June 2022

Workshop at the ELIXIR All Hands 2022, Amsterdam, Netherlands Johan Gustafsson, Steven Manos, Nigel Ward, Andrew Lonie, Brian Davis, Sarah Beecroft, Carole Goble, Finn Bacall, Nicola Soranzo, Bjӧrn Grüning, Herve Menager, Hans Ienasescu
8 June 2022

Workshop at the ELIXIR All Hands 2022, Amsterdam, Netherlands Marianna Ventouratou
8 June 2022

Workshop at the ELIXIR All Hands 2022, Amsterdam, Netherlands Katharina Heil
8 June 2022

Workshop at the ELIXIR All Hands 2022

ELIXIR All Hands 2022, Amsterdam, Europe Katharina Heil
8 June 2022

Workshop at the ELIXIR All Hands 2022

ELIXIR All Hands 2022, Amsterdam, Europe Marianna Ventouratou
7 June 2022

Workshop at the ELIXIR All Hands 2022, Amsterdam, Netherlands Anup Kumar, Kaivan Kamali, Leyla Jael Castro, Fotis E. Psomopoulos and Björn Grüning
7 June 2022

Workshop at the ELIXIR All Hands 2022, Amsterdam, Netherlands Fotis Psomopoulos, Jessica Lindvall, Katharina Heil, Ana P. Melo, Alexia Cardona, Eija Korpelainen, Patricia Palagi, Loredana Le Pera, Eva Alloza, Bérénice Batut, Egon Willighagen
7 June 2022

Workshop at the ELIXIR All Hands 2022

ELIXIR All Hands 2022, Amsterdam, Europe Anup Kumar, Kaivan Kamali, Leyla Jael Castro, Fotis E. Psomopoulos and Björn Grüning
7 June 2022

Members of the ELIXIR Galaxy Community, Tools Platform and the Biodiversity Focus Group will introduce the Vertebrate Genomes Project (VGP) and European Reference Genome Atlas (ERGA) initiatives.

ELIXIR All Hands 2022, Amsterdam, Europe Nicola Soranzo, Bérénice Batut, Anthony Bretaudeau, Johan Gustafsson, Jennifer Harrow, Saskia Hiltemann, Jerry Lanfear, Yvan Le Bras, Krzysztof Poterlowicz, Helena Rasche, Beatriz Serrano-Solano, Andrew Lonie, Frederik Coppens, Björn Grüning
7 June 2022

Workshop at the ELIXIR All Hands 2022

ELIXIR All Hands 2022, Amsterdam, Europe Alex Kanitx, Gavin Farrell, Jennifer Harrow, Jonathan Tedds, Finn Bacall, Tewodros Deneke, Álvaro González, Björn Grüning, Lukáš Hejtmánek, Sven Twardziok, Thanasis Vergoulis
7 June 2022

Workshop at the ELIXIR All Hands 2022

ELIXIR All Hands 2022, Amsterdam, Europe Fotis Psomopoulos, Jessica Lindvall, Katharina Heil, Ana P. Melo, Alexia Cardona, Eija Korpelainen, Patricia Palagi, Loredana Le Pera, Eva Alloza, Bérénice Batut, Egon Willighagen
7 June 2022

Workshop at the ELIXIR All Hands 2022, Amsterdam, Netherlands Alex Kanitx, Gavin Farrell, Jennifer Harrow, Jonathan Tedds, Finn Bacall, Tewodros Deneke, Álvaro González, Björn Grüning, Lukáš Hejtmánek, Sven Twardziok, Thanasis Vergoulis
2 June 2022Galaxy Metabolomics Community Call: Galaxy Interactive Tools - how to create and use them

Dan Blankenberg will present 'How to create and use Galaxy Interactive Tools'

online Melanie Föll
26 May 2022Galaxy Community Call: Galaxy on AnVIL

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Mike Schatz
24 May 2022

European Bioinformatics Institute, Hinxton, United Kingdom Ajay Mishra, Claire O'Donovan, Thomas Payne, Pamela Pruski
24 May 2022

Applications close 18 February

EMBL-EBI, Online, Hinxton, United Kingdom Ajay Mishra, Claire O'Donovan, Thomas Payne, Pamela Pruski
19 May 2022GTN CoFest & Galaxy Papercuts CoFest Day

A community contribution day

Online, Global Community
18 May 2022

The Galaxy Proteomics communities in the US, Australia and Europe regularly come together online to talk about topics of shared interest. All are welcome!

Australian BioCommons, Online, Australia johan@biocommons.org.au
18 May 2022

online de.NBI
17 May 2022

Montpellier, France Stéphanie Bedhomme & Anton Nekrutenko
17 May 2022Small Scale Galaxy Admins Meeting

Online, Global Hans-Rudolf Hotz
12 May 2022Galaxy Community Call: GCC Demo Coordination

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global TBA
28 April 2022Galaxy Community Call: The new History

A forum to share updates and discuss community-wide topics

Galaxy Community Call, Online, Global Aysam Guerler, Marius van der Beek, Beatriz Serrano-Solano
27 April 2022

This course will give a general introduction on the galaxy web-page structure, how to import data, run tools, and share analyses. Participants will run a whole NGS analysis using an RNA-seq dataset as an example.

Lausanne (or online), SwitzerlandTraining offered by GTN Member Lucille Delisle, Hans-Rudolf Hotz
29 March 2022

Microbiome analysis going from samples, to sequencing, to numerical ecology analysis

Earlham Institute & Quadram Institute, Virtual, United KingdomTraining offered by GTN Member Falk Hildebrand
14 March 2022

Get a taste of all the GTN has to offer!

Online, GlobalTraining offered by GTN Member Saskia Hiltemann & Helena Rasche
10 March 2022

online
7 March 2022

Applications close 31 December

EMBL-EBI, Online, Hinxton, United Kingdom Dayane Araújo, Wendi Bacon
3 March 2022

The last 13 weeks have been spent with Outreachy interns, Chinonye Mildred Egenti and Rahmot Afolabi, under the mentorship of Bérénice Batut and Assunta DeSanto to create the Galaxy Mentor Network and her mentoring program.

Chinonye Mildred Egenti, Rahmot Afolabi, Bérénice Batut, Assunta DeSanto
20 January 2022Galaxy Papercuts CoFest Day

A community contribution day

Online, Global Community
18 January 2022Small Scale Galaxy Admins Meeting

Online, Global Hans-Rudolf Hotz
17 January 2022

Register by December 15

Station Biologique de Roscoff, FranceTraining offered by GTN Member Loraine Guéguen, Erwan Corre
9 December 2021

online
1 December 2021SARS-CoV-2 Data Analysis and Monitoring with Galaxy

...upload viral sequencing data, call all variants, create a variety of reports and create consensus alignments...

University of Freiburg, New England Biolabs, OnlineTraining offered by GTN Member Instructors
1 December 2021SARS-CoV-2 Data Analysis and Monitoring with Galaxy

online
1 December 2021

A 3-day training course on bioinformatics methods for de novo assembly and structural and functional annotation of genomes using short (Illumina) and long reads (PacBio / Oxford Nanopore) sequencing technologies (will be run in french).

Station Biologique, Roscoff, FranceTraining offered by GTN Member Anthony Bretaudeau, Alexandre Cormier, Erwan Corre, Stéphanie Robin
30 November 2021

GOBLET, ELIXIR
29 November 2021

Learn to work with NGS data of 16S, 18S, ITS … DNA using our Galaxy instance and the FROGS pipeline.

INRA, Toulouse-Auzeville, FranceTraining offered by GTN Member
29 November 2021

Curso de análisis de células únicas usando Galaxy en español.

Virtual y asincrónico, Global Stefana Dreptate, Wendi Bacon