SHAMAN

Public server:
Scope:
Summary:A user-friendly website for metataxonomic analysis from raw reads to statistical analysis

Comments

  • The SHAMAN server does not look like Galaxy, but it uses the Galaxy@Pasteur server for data analysis and workflow execution.
  • SHAMAN is a shiny application for differential analysis of metagenomic data (16S, 18S, 23S, 28S, ITS and WGS) including bioinformatics treatment of raw reads for targeted metagenomics, statistical analysis and results visualization with a large variety of plots (barplot, boxplot, heatmap, …).

User Support

  • A tutorial and User Guide are available.

Quotas

  • Anonymous access is supported with a reduced quota; anyone can create an account.

Citations

Sponsors

  • C3BI, Insitut Pasteur