ELIXIR-IT/Laniakea Galaxy Event Archive
Old events relevant to the ELIXIR-IT/Laniakea Galaxy community.
Date | Topic/Event | Venue/Location | Contact |
---|---|---|---|
2 June 2022 | Galaxy Metabolomics Community Call: Galaxy Interactive Tools - how to create and use them Dan Blankenberg will present 'How to create and use Galaxy Interactive Tools' | ![]() | Melanie Föll |
26 May 2022 | Galaxy Community Call: Galaxy on AnVIL A forum to share updates and discuss community-wide topics | ![]() | Mike Schatz |
24 May 2022 |
| European Bioinformatics Institute, Hinxton, United Kingdom | Ajay Mishra, Claire O'Donovan, Thomas Payne, Pamela Pruski |
24 May 2022 | Applications close 18 February | ![]() | Ajay Mishra, Claire O'Donovan, Thomas Payne, Pamela Pruski |
19 May 2022 | GTN CoFest & Galaxy Papercuts CoFest Day A community contribution day | ![]() | Community |
18 May 2022 | The Galaxy Proteomics communities in the US, Australia and Europe regularly come together online to talk about topics of shared interest. All are welcome! | ![]() | johan@biocommons.org.au |
18 May 2022 |
| online | de.NBI |
17 May 2022 |
| Montpellier, France | Stéphanie Bedhomme & Anton Nekrutenko |
17 May 2022 | Small Scale Galaxy Admins Meeting
| ![]() | Hans-Rudolf Hotz |
12 May 2022 | Galaxy Community Call: GCC Demo Coordination A forum to share updates and discuss community-wide topics | ![]() | TBA |
28 April 2022 | Galaxy Community Call: The new History A forum to share updates and discuss community-wide topics | ![]() | Aysam Guerler, Marius van der Beek, Beatriz Serrano-Solano |
27 April 2022 | This course will give a general introduction on the galaxy web-page structure, how to import data, run tools, and share analyses. Participants will run a whole NGS analysis using an RNA-seq dataset as an example. | ![]() | ![]() |
29 March 2022 | Microbiome analysis going from samples, to sequencing, to numerical ecology analysis | ![]() | ![]() |
14 March 2022 | Get a taste of all the GTN has to offer! | ![]() | ![]() |
10 March 2022 |
| online | |
7 March 2022 | Applications close 31 December | ![]() | Dayane Araújo, Wendi Bacon |
3 March 2022 | The last 13 weeks have been spent with Outreachy interns, Chinonye Mildred Egenti and Rahmot Afolabi, under the mentorship of Bérénice Batut and Assunta DeSanto to create the Galaxy Mentor Network and her mentoring program. | Chinonye Mildred Egenti, Rahmot Afolabi, Bérénice Batut, Assunta DeSanto | |
20 January 2022 | Galaxy Papercuts CoFest Day A community contribution day | ![]() | Community |
18 January 2022 | Small Scale Galaxy Admins Meeting
| ![]() | Hans-Rudolf Hotz |
17 January 2022 | Register by December 15 | ![]() | ![]() |
9 December 2021 |
| online | |
1 December 2021 | SARS-CoV-2 Data Analysis and Monitoring with Galaxy ...upload viral sequencing data, call all variants, create a variety of reports and create consensus alignments... | ![]() | ![]() |
1 December 2021 | SARS-CoV-2 Data Analysis and Monitoring with Galaxy
| online | |
1 December 2021 | A 3-day training course on bioinformatics methods for de novo assembly and structural and functional annotation of genomes using short (Illumina) and long reads (PacBio / Oxford Nanopore) sequencing technologies (will be run in french). | ![]() | ![]() |
30 November 2021 |
| GOBLET, ELIXIR | |
29 November 2021 | Learn to work with NGS data of 16S, 18S, ITS … DNA using our Galaxy instance and the FROGS pipeline. | ![]() | ![]() |
29 November 2021 | Curso de análisis de células únicas usando Galaxy en español. | ![]() | Stefana Dreptate, Wendi Bacon |
25 November 2021 | Galaxy Metabolomics Community Call Recent developments and future plans in the Galaxy Metabolomics community, including a summary of the metaRbolomics Hackathon. | ![]() | Melanie Foell |
18 November 2021 | Galaxy Papercuts CoFest Day A community contribution day | ![]() | Community |
11 November 2021 | Separated data PVC: How it works and potential missed implications; and 21.09 Release Testing Join the discsussion (Slides: 21.09 Release Testing) | ![]() | Alexandru Mahmoud, Keith Suderman |
9 November 2021 |
| CSIR-North East Institute of Science & Technology | |
8 November 2021 | Galaxy @ BioHackathon-Europe 2021 Advance the development of an open-source infrastructure for data integration | ![]() | Project organizers |
4 November 2021 | Open to everybody interested in Genome Annotation or Galaxy | ![]() | ![]() |
2 November 2021 |
| Anne Fouilloux | |
1 November 2021 | Course is full | ![]() | ![]() |
28 October 2021 | Image analysis in Galaxy - pain points and lessons learnt | ![]() | Yi Sun, Jean-Karim Hériché |
22 October 2021 | Gallantries Project: Delivering Galaxy hybrid events, and evolving with the pandemic | ![]() | Helena Rasche |
22 October 2021 | Talk showcasing the image analysis capabilities of Galaxy. | ![]() | Beatriz Serrano-Solano |
21 October 2021 | Galaxy Papercuts CoFest Day A community contribution day | ![]() | Community |
20 October 2021 | Organised by the Galaxy Proteomics communities in the US, Australia and Europe. | ![]() | Johan Gustafsson, Grace Hall, Pratik Jagtap |
19 October 2021 | Savoir utiliser l'environnement Galaxy | ![]() | ![]() |
11 October 2021 |
| UMR Toxalim, INRAE, Toulouse, France | |
23 September 2021 | microGalaxy is a new community focusing on microbial analysis with Galaxy | ![]() | Bérénice Batut |
16 September 2021 | Galaxy Papercuts CoFest Day A community contribution day | ![]() | Community |
14 September 2021 | Part of Cycle "Bioinformatique par la pratique" 2021 | ![]() | ![]() |
8 September 2021 | Part of Cycle "Bioinformatique par la pratique" 2021 | ![]() | ![]() |
9 August 2021 | SARS-CoV-2 Data Analysis and Monitoring with Galaxy ...upload viral sequencing data, call all variants, create a variety of reports and create consensus alignments... | ![]() | ![]() |
29 July 2021 | Utilization of a Galaxy-based workflow to support decision making in molecular cancer diagnostics
| online (https://uk-erlangen.webex.com/uk-erlangen/j.php?MTID=mfa8088026974da77de04e981fb3b7abd) | Pilot Core Unit Bioinformatics, Data Integration and Analysis, Universitätklinikum Erlangen |
25 July 2021 | Galaxy @ ISMB/ECCB 2021 & BOSC 2021
| ![]() | Presenters |
15 July 2021 | NFDI4BIOIMAGE community meeting 2021
| online (https://nfdi4bioimage.de/en/get-involved/community-meeting-2021/) | NFDI4BI |
12 July 2021 | Galaxy-E at SORTEE 2021 Open, reliable, and transparent ecology research with Galaxy-E | ![]() | ![]() |
28 June 2021 |
| online | |
24 June 2021 | Introduction to Galaxy - a web-based platform for bioinformatics analysis
| online (https://uk-erlangen.webex.com/uk-erlangen/j.php?MTID=mfa8088026974da77de04e981fb3b7abd) | Pilot Core Unit Bioinformatics, Data Integration and Analysis, Universitätklinikum Erlangen |
21 June 2021 |
| ||
17 June 2021 | June GCC2021 CoFest Prep Day GCC Cofest prep is pre-empting the June Papercuts day | ![]() | GCC2021 CoFest Organizers |
11 June 2021 | Showcasing the image analysis capabilities of Galaxy. | ![]() | Beatriz Serrano-Solano |
7 June 2021 | Register by 14 April (Video) | ![]() | Bérénice Batut |
3 June 2021 | ELIXIR 2021 All Hands
| online | |
28 May 2021 | Gathering the Dutch Galaxy Community | ![]() | Saskia Hiltemann |
28 May 2021 | Full. Part of Cycle "Bioinformatique par la pratique" 2021 | ![]() | ![]() |
27 May 2021 | Release Testing What's changed recently, and what's involved (Video, Slides) | ![]() | Keith Suderman, Dave Bouvier, David López, Qiang Gu, Vijay Nagampal, Marius van den Beek |
27 May 2021 | Full. Part of Cycle "Bioinformatique par la pratique" 2021 | ![]() | ![]() |
26 May 2021 | Galaxy Resources for Administrators & Infrastructure Providers | ![]() | Gianmauro Cuccuru, Lucille Delisle |
25 May 2021 | Full. Theoretical and practical aspects of using next generation sequencing (NGS) data for analyzing repeat composition of plant genomes. (Register) | ![]() | Jiří Macas |
25 May 2021 | Introduction to basic concepts and tools from the ASaiM-MT workflow. | ![]() | ![]() |
20 May 2021 | Galaxy Papercuts CoFest Day: May 20 A community contribution day | ![]() | Community |
13 May 2021 | Customizeable welcome and introduction page for new Galaxy users Giving new users some obvious guidance when they first arrive. (Video, Slides) | ![]() | Alex Ostrovsky |
12 May 2021 | Galaxy Resources for Tool Developers Part of the Galaxy Resources Webinar Series (Video, Ecosystem slides, Docker slides, Server slides) | ![]() | Dan Blankenberg, Anthony Bretaudeau, Petr Novak |
6 May 2021 | Galaxy Metabolomics Community Call
| online | Melanie Foell |
4 May 2021 | Savoir utiliser l'environnement Galaxy | ![]() | ![]() |
29 April 2021 | Scalability and Challenges | ![]() | Aysam Guerler |
28 April 2021 |
| SIB Training, Lausanne, Switzerland | |
28 April 2021 | Galaxy Resources for Educators & Trainers Part of the Galaxy Resources Webinar Series (Video, Slides 1, Slides 2) | ![]() | Saskia Hiltemann, Subina Mehta, Christine Cucinotta, Miaomiao Zhou, Bérénice Batut |
26 April 2021 |
| online | |
22 April 2021 | immuneML is a platform for the analysis of adaptive immune receptors through machine learning. (Video) | ![]() | Lonneke Scheffer, Milena Pavolović |
21 April 2021 | Galaxy Resources for Researchers | ![]() | Dave Clements |
19 April 2021 | ...with a special focus on bulk and single-cell RNA-Seq data analysis... | ![]() | ![]() |
16 April 2021 | a high level overview of the Galaxy Project - what it is, what it does and how to start using it. And the Elixir Galaxy and currently forming Galaxy Czech communities (Slides) | ![]() | Martin Čech |
15 April 2021 | Galaxy Papercuts CoFest Day: April 15 A community contribution day | ![]() | Community |
13 April 2021 | Online course by ELIXIR Norway | ![]() | ![]() |
12 April 2021 | Next generation sequencing for RNA-Seq and Epigenetics | ![]() | ![]() |
7 April 2021 | Online course by ELIXIR Norway | ![]() | ![]() |
6 April 2021 | Full. Part of Cycle "Bioinformatique par la pratique" 2021 | ![]() | ![]() |
24 March 2021 | Speed up your data analysis with Galaxy: Features no one knows about
| online | Galaxy and ELIXIR |
23 March 2021 | Online course by ELIXIR Norway | ![]() | ![]() |
18 March 2021 | Bringing GPU support to Galaxy Progress towards executing GPU applications in Galaxy (Video) | ![]() | Jashwant Raj, Gulsum Gudukbay |
18 March 2021 | Galaxy Papercuts CoFest Day: March 18 A community contribution day | ![]() | Community |
17 March 2021 | Galaxy bridge to Jupyter notebooks and RStudio Jupyter Notebooks and RStudio in combination with Galaxy workflows (Video, Slides) | ![]() | Galaxy and ELIXIR |
17 March 2021 | Full. Part of Cycle "Bioinformatique par la pratique" 2021 | ![]() | ![]() |
10 March 2021 | Processing thousands of datasets simultaneously
| online | Galaxy and ELIXIR |
10 March 2021 | Galaxy collections and advanced collections features (Register) | ![]() | Wolfgang Maier, Anton Nekrutenko |
4 March 2021 | Release Testing What's changed recently, and what's involved (Slides, Video) | ![]() | Sergey Golitsynskiy, David López, Assunta DeSanto, Keith Suderman, John Chilton |
3 March 2021 | Advanced Galaxy workflow features From parameter sweeping to automatic reports (Slides, Video) | ![]() | Galaxy and ELIXIR |
25 February 2021 | GTN CoFest & Galaxy Paper Cuts
| online | |
24 February 2021 | DRS, long-read-sequencing, proteomics and more - An update to recent COVID-19 workflow developments
| online | Galaxy and ELIXIR |
17 February 2021 | Viral Beacon and Galaxy variant workflows
| online | Galaxy and ELIXIR |
17 February 2021 | Part of Cycle "Bioinformatique par la pratique" 2021 | ![]() | ![]() |
16 February 2021 | Full. Part of Cycle "Bioinformatique par la pratique" 2021 | ![]() | ![]() |
15 February 2021 | GTN Smörgåsbord: A Global Galaxy Course Get a taste of all the GTN has to offer! | ![]() | ![]() |
10 February 2021 | Insights from selection analysis of complete genomes and read-level data
| online | Galaxy and ELIXIR |
4 February 2021 | Galaxy Developer Training & Onbarding; GTN Update How to grow the Galaxy Developer community? Admin Training Update (Slides, Video) | ![]() | Dannon Baker, Beatriz Serrano-Solano, Dave Clements, Saskia Hiltemann, Helena Rasche |
3 February 2021 | Supporting the COVID-19 Data portal: viral data cleaning from human reads and submission to ENA
| online | Galaxy and ELIXIR |
27 January 2021 | Importance of (open) infrastructures in responding to a pandemic
| online | Galaxy and ELIXIR |
25 January 2021 | 2021 Galaxy Admin Training The ins and outs of setting up your own production quality Galaxy server. | ![]() | ![]() |
21 January 2021 | Galaxy Developer Roundtable: FastAPI (Video) | ![]() | Marius van den Beek |
21 January 2021 | Galaxy Papercuts CoFest Day: January 21 A community contribution day | ![]() | Community |
20 January 2021 | COVID-19 analysis in Galaxy: Lessons learned and introduction to the series
| online | Galaxy and ELIXIR |
7 January 2021 | Galaxy Working Groups Follow Up and Discussion How are we doing after a month? (Video) | ![]() | Björn Grüning, Anton Nekrutenko |
17 December 2020 | Galaxy Papercuts CoFest Day: December 17 A community contribution day | ![]() | Community |
10 December 2020 | Galaxy Working Groups: Distributing project guidance to the community Distributing Galaxy Guidance: Working Groups (Video) | ![]() | Björn Grüning, Anton Nekrutenko |
10 December 2020 | First Metabolomics Community Call Bringing together Galaxy metabolomics researchers, users and developers, to discuss needs, ideas, ... | ![]() | Melanie Foell |
9 December 2020 | Webinar: Use Galaxy on the web, the cloud, and your laptop too Options for using Galaxy: everywhere and right now (Slides, Video) | ![]() | Enis Afgan, Anton Nekrutenko, Michael Schatz |
7 December 2020 | Hackathon sur les outils interactifs de Galaxy (GxIT) Learn and share software development and system administration skills of [Galaxy Interactive Tools](https://docs.galaxyproject.org/en/master/admin/special_topics/interactivetools.html). | online | geoc@groupes.renater.fr |
3 December 2020 | Label-free Proteomics data analysis in Galaxy | ![]() | ![]() |
19 November 2020 |
| Galaxy Training Network | |
19 November 2020 | Galaxy Training Network day - (online) CoFest and community call
| ![]() | ![]() |
18 November 2020 | Galaxy Paper Cuts Day: November 18 A community contribution day | ![]() | Community |
12 November 2020 | Working with the Galaxy Training Network Galaxy Training Network (Video) | ![]() | Helena Rasche and Saskia Hiltemann |
9 November 2020 | ELIXIR BioHackathon Europe
| online | |
3 November 2020 | Diving into the Galaxy: an accessible and reproducible workbench with an European-wide distributed compute network
| online | EGI |
29 October 2020 | Galaxy Developer Roundtable Tool testing and tool deployment discussion (Video) | ![]() | Dannon Baker, John Chilton, Marius van den Beek |
21 October 2020 | Galaxy Paper Cuts Day A community contribution day | ![]() | Community |
15 October 2020 | Galaxy release testing and publishing workflows to Dockstore and Workflowhub (Video) | ![]() | Sergey Golitsynskiy, Marius van den Beek |
15 October 2020 |
| online | |
12 October 2020 | Bridging the gap between climate scientists and non-climate specialists | ![]() | Anne Fouilloux |
1 October 2020 | Galaxy Developer Roundtable
| online | |
17 September 2020 | Galaxy Developer Roundtable
| online | |
8 September 2020 | The ELIXIR Tools Platform - solutions for COVID-19 research
| online | Freiburg Galaxy Team |
31 August 2020 | Machine Learning & Omics data at ECCB2020
| online | Freiburg Galaxy Team |
30 July 2020 | Galaxy Africa Community Update
| Online | |
19 July 2020 | Processing of Single Cell RNA-Seq Data with Galaxy
| Online | Freiburg Galaxy Team |
19 July 2020 | High-throughput molecular dynamics with Galaxy
| Online | Freiburg Galaxy Team |
18 July 2020 | Reference data with CVMFS and remote jobs with Pulsar
| Online | Freiburg Galaxy Team |
18 July 2020 | Introduction to Machine Learning at BCC2020
| online | Freiburg Galaxy Team |
18 July 2020 | Workshop on Tool Packaging at BCC2020
| online | EOSC-Life-WP2 |
17 July 2020 | Biocontainers at the nf-core Hackathon
| online | Freiburg Galaxy Team |
17 July 2020 | Processing of Single Cell RNA-Seq Data with Galaxy
| Online | Freiburg Galaxy Team |
15 July 2020 | Machine Learning in Bioinformatics using Galaxy at IISA2020
| online | Freiburg Galaxy Team |
22 June 2020 | Galaxy-ELIXIR Webinar/Workshop: Machine Learning using Galaxy Register by 16 June | ![]() | ![]() |
28 May 2020 | Galaxy-ELIXIR Webinar 5: Behind the scenes - Global Open Infrastructures at work
| Galaxy and ELIXIR | |
20 May 2020 | Galaxy-ELIXIR Webinar 4: Evolution of the Virus
| online | Galaxy and ELIXIR |
19 May 2020 | Online Galaxy Introduction Workshop
| online | Freiburg Galaxy Team |
14 May 2020 | Galaxy-ELIXIR Webinar 3: Cheminformatics - Screening of the main protease
| online | Galaxy and ELIXIR |
7 May 2020 | Galaxy-ELIXIR Webinar 2: Genomics/Variant Calling
| online | Galaxy and ELIXIR |
30 April 2020 | Galaxy-ELIXIR Webinar 1: Introduction to Galaxy and the Galaxy workflows for SARS-CoV-2 data analysis
| online | Galaxy and ELIXIR |
28 April 2020 | ELIXIR Bioinformatics Industry Forum
| online | |
8 April 2020 | Online Galaxy Introduction Workshop
| online | Freiburg Galaxy Team |
30 March 2020 | EVENT POSTPONED - Introduction to machine learning using Galaxy
| PC Pool 3 | Freiburg Galaxy Team |
20 March 2020 | WirVsVirus Hackathon
| online | Bundesregierung |
2 March 2020 | 2020 Galaxy Admin Training
| Barcelona Supercomputing Center | |
18 November 2019 | Elixir Biohackathon 2019
| Campus des berges de Seine | Elixir, Elixir-FR |
16 May 2019 | GTN CoFest and community call
| ![]() | Bérénice Batut, Saskia Hiltemann |
21 February 2019 | GTN CoFest and call on Galaxy Training Material
| ![]() | Bérénice Batut, Saskia Hiltemann |
15 November 2018 | GTN CoFest on Training Material
| Galaxy Training Network | |
26 June 2018 | Galaxy Community Conference / BOSC
| Galaxy Team | |
17 June 2018 | ELIXIR 2019 All Hands
|