Galaxy @ ASM BIG 2026
Galaxy heads to ASM BIG 2026 with an invited talk from Mike Schatz and a table open for the whole meeting — stop by to talk BRC-Analytics, Orbit, User Defined Tools, workflows, HPC, and more.
Galaxy is heading to ASM BIG 2026 — the ASM Bioinformatics, Genomics and Big Data Conference (formerly ASM NGS) — held October 11–14, 2026 at the Hyatt Regency Washington on Capitol Hill in Washington, DC.
Invited Talk
Mike Schatz (Johns Hopkins University) from the Galaxy community will give an invited talk.
Find Galaxy All Week
Members of the Galaxy team will be at the meeting for its full duration with a table where anyone can stop by to chat, ask questions, grab some candy, or just say hi. Topics we’re happy to talk about include:
- BRC-Analytics — analysis tools and genomic annotations for pathogen, host, and vector data
- Orbit — Galaxy’s AI research harness that lets you converse about your data, draft and run analysis plans, and route steps to Galaxy
- User Defined Tools (currently in beta) — write and run your own simple tools directly from the Galaxy interface, no server access or admin installation required. Contact us for access
- Workflows (IWC) — the Intergalactic Workflow Commission’s library of open, peer-reviewed workflows for reproducible science
- High Performance Computing — compute provided to usegalaxy.org via Jetstream2 and TACC
- Petabase-scale sequence search — the Logan database and the tools that search it (kmindex, Logan Protein, LexicMap), all runnable in Galaxy (see below)
- Reproducible computational biology
- Free access — Galaxy is free to use for everyone
Come find us to learn more about how Galaxy can support your microbial genomics and bioinformatics work.
Searching All of Public Sequencing Data
Ask us about searching the world’s public sequencing data. At the base is one database:
Logan — a planetary-scale assembly of the entire NCBI Sequence Read Archive: 38 million accessions (87 petabases of raw reads, December 2025 freeze) assembled into freely downloadable contigs and unitigs, hosted on AWS Open Data (Chikhi et al., bioRxiv; v1.2 release notes). Hear the story in our GCC2026 keynote recap.
Three tools sit on top of Logan to search it — all runnable in Galaxy on usegalaxy.org:
- kmindex — k-mer search that answers “which samples contain my sequence?” in fractions of a second; it is the engine behind the Logan Search web server (Lemane et al., Nature Computational Science 2024). In Galaxy: kmindex build and kmindex query.
- Logan Protein — protein-level search of Logan using pre-computed embeddings, newly available in Galaxy as the Logan protein search tool.
- LexicMap — “gold-standard” alignment of a gene, plasmid, or long read against millions of genomes at once (Shen, Lees & Iqbal, Nature Biotechnology 2025). In Galaxy: LexicMap index and LexicMap search — with BRC-Analytics integration in the works.
Flyer Resources
Picked up one of our flyers at the meeting (or scanned its QR code)? Here’s where to go deeper on everything we featured.
Get started with Galaxy
- usegalaxy.org — free public Galaxy server, with free compute and storage (sibling servers: usegalaxy.eu, usegalaxy.org.au)
- Galaxy Training Network — hundreds of free, hands-on tutorials, including a full microbiome topic
- Galaxy Help — community question & answer forum
Microbiology on Galaxy
- Microbiology Galaxy Lab — a dedicated microbiology view of Galaxy with 315+ tool suites, 115+ workflows, and 40+ tutorials, curated by the microGalaxy community
- Microbiology Galaxy Lab paper (Nasr, Pechlivanis, et al., F1000Research 2025)
- PathoGFAIR (Nasr et al., GigaScience 2025) — FAIR, adaptable Galaxy workflows for (foodborne) pathogen detection and tracking from Nanopore sequencing
BRC-Analytics
- brc-analytics.org — analytics for pathogen, host, and vector data: ~2,000 organisms with reference genomes and annotations from NCBI Datasets, curated workflows, and free compute. Choose an organism, pick a workflow, and Galaxy runs it.
- Getting started guide and roadmap
- BRC-Analytics is open for business! — a measles virus case study showing data-to-publication analysis entirely in the browser
- Part of NIAID’s Bioinformatics Resource Centers program
Orbit
- Orbit — download the desktop app for macOS, Linux, and Windows (open source, in beta)
- Orbit support forum — early-access help, bug reports, and feedback
- Case study — standardizing fungal pathogen RNA-seq with BRC-Analytics and agentic AI: eight frontier LLMs reanalyze a Candidozyma auris study on Galaxy through Orbit
Workflows and tools
- IWC workflow library — curated, peer-reviewed, continuously tested workflows
- BioContainers — the container packaging behind the 100,000+ tools available in Galaxy
- User Defined Tools — bring your own scripts into Galaxy (beta)
Upcoming events
- Galaxy Training Academy — Spring 2027 — a week of free, global, online Galaxy training; potential topics include metagenomics and bacterial genomics. Watch training.galaxyproject.org for announcements.
- Galaxy Community Conference 2027 — June 28 – July 1, 2027, at Université de Sherbrooke. Watch galaxyproject.org for announcements.