This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.
31 contributions
News (27)
Usegalaxy.eu has reached 50,000 registered users
Big thanks to everybody that has contributed to the success of UseGalaxy.eu and to each of the 50K users for using Galaxy! Next stop: 100K!
[GTN news] New Tutorial Feature: Choose Your Own Tutorial
It has been a long discussed feature within the GTN Tutorial Author Community: how can we provide trainees with choice in their tutorials, and how can we as trainers not duplicate large tutorials just to show a slightly different path at one point?.
[GTN news] New Tutorial: VGP assembly pipeline
We are proud to announce that, as result of the collaboration with the Vertebrate Genomes Project (VGP), a new training describing the VGP assembly pipeline is now available in the Galaxy Training Network
[GTN news] New Feature: Automatic RMarkdown
Further building on the work in the automatic Jupyter Notebook, we’ve now re-written the Jupyter export to be faster, and more importantly added support for R and RMarkdown!
[GTN news] Support for annotating Funding Agencies
The Galaxy Training Network will now support annotating Funding Agencies on training materials.
[GTN news] GTN Smörgåsbord 2: Tapas Edition
GTN Smörgåsbord 2: 14-18 March
A second Smörgåsbord with even more Galaxy Training
[GTN news] New Tutorials: PacBio data QC and Genome Assembly, and Genome Annotation with Funannotate
We have just finished a new collection of training material for genome assembly and annotation!
[GTN news] New FAQs: How does the GTN stay FAIR and Collaborative
The GTN does a lot of work to adhere to the best practices for FAIR training materials as set out in Garcia et al.
[GTN news] New Feature: GTN Video Library
After runnning a number of virtual training events this year (e.g.
GTN Video Library
Videos from online training events are now easier to find.
Training Infrastructure feedback: FORCeS eScience course
Tools in Climate Science: Linking Observations with Modelling
GTN API with OpenAPI 3 specification
Access data from the GTN in a more accessible, API based way.
[GTN news] New Topic: Data Science Survival Kit
As part of our work under the Gallantries Grant we are establishing a new topic within the GTN specifically focused on Data Science skills.
[GTN news] New Feature: a feedback page to aggregate and display feedback answers
As you have probably already seen, a feedback form is embedded on the bottom of each tutorial.
[GTN news] Accessibility Improvements
Accessibility Improvements One of our community members suggested on twitter that we support alternative formats for accessing our JavaScript based slides, as this can be difficult for users using…
[GTN news] New Tutorial: Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data
Effectively monitoring global infectious disease crises, such as the COVID-19 pandemic, requires capacity to generate and analyze large volumes of sequencing data in near real time.
[GTN news] New Tutorial: Visualization of RNA-Seq results with Volcano Plot in R
The Volcano plot tutorial introduced volcano plots and showed how they can be easily generated with the Galaxy Volcano plot tool.
[GTN news] New Tutorial: GitPod for contributing to the GTN
Want to contribute to the GTN without installing anything on your own computer?
[GTN news] New Tutorial: Genome Annotation with Apollo
After two years, the Galaxy Genome Annotation team has finally finished their much awaited tutorial on doing Genome Annotation in Galaxy!
Events (4)
A practical workshop for (foodborne) pathogen detection from (direct Nanopore) sequencing data using Galaxy
The purpose of this workshop is to gain knowledge on detect (foodborne) pathogens from (direct Nanopore) sequencing data using Galaxy. The workshop will be on February 2nd 2023 as a 1-day hybrid (F2F at FHNW Muttenz, Switzerland and online), free and practical workshop.
SARS-CoV-2 Data Analysis and Monitoring with Galaxy
...upload viral sequencing data, call all variants, create a variety of reports and create consensus alignments...
SARS-CoV-2 Data Analysis and Monitoring with Galaxy
SARS-CoV-2 Data Analysis and Monitoring with Galaxy
...upload viral sequencing data, call all variants, create a variety of reports and create consensus alignments...