UseGalaxy.eu Tool Updates for 2020-02-01
On 2020-02-01, the tools on UseGalaxy.eu were updated by our automated tool update and installation process in Jenkins Build #178
Evolution
- iqtree was updated to 973a28be3b7f
Assembly
- miniasm was updated to 2dcd07f40204
FASTA/FASTQ
- fasta_nucleotide_changer was updated to ec0b5076173a
- fastq_quality_boxplot was updated to 7cf5b1d072b5
- fastq_quality_filter was updated to ce9cd02d5b88
- fastq_to_fasta was updated to e282bc27be9a
- fastx_artifacts_filter was updated to d5e9e83cd3d8
- fastx_clipper was updated to b8658f852bc7
- fastx_nucleotides_distribution was updated to ad116ae3f4d9
- fastx_renamer was updated to b29d37ca9e41
- fastx_reverse_complement was updated to 6027ef51ef91
- fastx_trimmer was updated to 61b4cedc8934
hca_sc_monocle3_tools
- monocle3_create was updated to a34f243f55a4
- monocle3_diffexp was updated to f91ddb6bc4ff
- monocle3_learngraph was updated to 98e99ab36505
- monocle3_ordercells was updated to e17c3123cdb5
- monocle3_partition was updated to 426e1a869cb3
- monocle3_plotcells was updated to 3e737c810a54
- monocle3_preprocess was updated to 0869b0264af1
- monocle3_reducedim was updated to 004a86dffd79
Graph/Display Data
- jbrowse was updated to edb534491f92
Variant Calling
- lofreq_alnqual was updated to 2953c43180c0
- lofreq_call was updated to 03627f24605f
- lofreq_filter was updated to fdba1586551d
- lofreq_indelqual was updated to 2ae554b4bcca
- lofreq_viterbi was updated to ecd80c7c3886
- snippy was updated to 3fe8ef358d66
ChemicalToolBox
- fastpca was updated to dd195f7a791c
- gmx_editconf was updated to e69ce1e7fb6a
- gmx_energy was updated to b4a47b4ed264
- gmx_makendx was updated to 01a435922dd5
- gmx_restraints was updated to f79f4671eaf2
Climate Analysis
- psy_maps was updated to 706666d912d5
RAD-seq
- stacks2_cstacks was updated to c541e62d6c56
Annotation
- gff_to_prot was updated to 2aea122fbd25
- transit_gumbel was updated to f50807720df1
- transit_hmm was updated to 532a84f0de1e
- transit_resampling was updated to ad4d42fabf32
- transit_tn5gaps was updated to 4aaabd55eab8
Single-cell
- dropletutils was updated to cdf4443d5625
- raceid_clustering was updated to 7e014059a88d
- raceid_filtnormconf was updated to 7608d5faee41
- raceid_inspectclusters was updated to 37a47c4fd84d
- raceid_inspecttrajectory was updated to 69018f285aa3
- raceid_trajectory was updated to 44b935f2271b