Galaxy Tour de France 2012

  • Date: September 21st 2017

Galaxy Tour de France 2012

Galaxy went on tour in France during the last week of May. Workshops were help in Perpignan, Montpellier, Lyon, and Paris. Registration was free.

Itinerary

Laboratoire de Biologie Intégrative des Organismes Marins
University of Perpignan Via Domitia
28 May, Perpignan
MABL/LIRMM
ATGC Bioinformatics Platform
29 May, CNRS Montpellier
Laboratoire Biométrie et Biologie Evolutive
30 May, Lyon
Inserm, Mines ParisTech, Institut Curie, Bioinformatics and Computational Systems Biology of Cancer
1 June, Paris
Galaxy for Biologists
9:00 - 12:00
This session is now full
Galaxy for Biologists
and Developers

12:00 - 15:30
Space available
Galaxy for Biologists
9:00 - 12:00
Space available
Galaxy for Biologists
9:00 - 12:00
Space available
Galaxy for Developers
14:00 - 17:00
This session is now full
Galaxy for Developers
14:00 - 17:00
Space available
Galaxy for Developers
14:00 - 17:00
Space available
Laboratoire Génome et
Développement des Plantes
Bâtiment T
58, Avenue Paul Alduy
66860 Perpignan
CNRS campus du CNRS
1919 Route de Mende
Montpellier
Bâtiment Thémis - Amphi 8
11 Avenue Gaston Berger
Université Lyon 1
Villeurbanne
Institut Curie
Amphithéatre Constant Burg
12 rue Lhomond
75005 Paris, France

Perpignan: 28 May

Location:

Perpignan Workshop location. Click to enlarge.
Perpignan workshop location

The workshops will be held in the seminar room of the Laboratoire Génome et Développement des Plantes (LGDP) of the University of Perpignan, the address details are:

Laboratoire Génome et Développement des Plantes
Bâtiment T
58, Avenue Paul Alduy
66860 Perpignan

Montpellier: 29 May

Location:

CNRS campus du CNRS
1919 Route de Mende
Montpellier

Lyon: 30 May

Location: Bâtiment Thémis - Amphi 8
11 Avenue Gaston Berger
Université Lyon 1
Villeurbanne

Paris: 1 June

Paris Workshop location and nearby Metro and RER stations. Click to enlarge.
Paris workshop location
nearby Metro & RER stations.

Location:

Institut Curie
Amphithéatre Constant Burg
12 rue Lhomond
75005 Paris, France

If you come by Metro: Line 10 stop at "Cardinal Lemoine"
Line 7 stop at "Place Monge"

If you come by RER: RER B stop at Luxembourg

If you attend both workshops and plan to eat in the area, there are many choices nearby (bakery, fast food, restaurants,...).


Workshop Details

Galaxy for Biologists

9:00-12:00

  • Basic concepts: interface, histories, workflows
  • Analysis of NGS data: polymorphism discovery, ChIP-seq. RNA-seq
  • Using your own instance on the Cloud
  • Publishing supplemental results with Galaxy Pages

Galaxy for Developers

Slides from Nate Coraor

14:00-17:00

  • Galaxy architecture
  • Wrapping tools for Galaxy system, Galaxy Toolshed
  • API
  • Running Production Galaxy sites: Infrastructure, Job Scheduling, Data and User management

Meet the Team!

Nate Coraor!   Anton Nekrutenko!   James Taylor!

Sponsors

This tour was generously sponsored and hosted by the Laboratoire de Biologie Intégrative des Organismes Marins, MABL/LIRMM, the ATGC Bioinformatics Platform, the Laboratoire Biométrie et Biologie Evolutive, and the Inserm - Mines ParisTech - Institut Curie - Bioinformatics and Computational Systems Biology of Cancer. Further support for the workshops was provided by an Amazon Web Services (AWS) Education Grant.

Laboratoire de Biologie Intégrative des Organismes Marins   CNRS    Laboratoire Biométrie et Biologie Evolutive   Inserm, Mines ParisTech, Institut Curie, Bioinformatics and Computational Systems Biology of Cancer   Amazon Web Services (AWS) in Education Grant