Galaxy is an open-source platform for FAIR data analysis that enables users to:

  • use tools from various domains (that can be plugged into workflows) through its graphical web interface.
  • run code in interactive environments (RStudio, Jupyter...) along with other tools or workflows.
  • manage data by sharing and publishing results, workflows, and visualizations.
  • ensure reproducibility by capturing the necessary information to repeat and understand data analyses.

The Galaxy Community is actively involved in helping the ecosystem improve and sharing scientific discoveries.

News

The 2024 Galaxy Community Update Paper is Here!

Discover the latest advancements and future directions of the Galaxy Project in the community's newly published 2024 update paper.

Galaxy in Research: Decoding chromatin interactions with asteRIa

Find out how Galaxy helps researchers unlock the mysteries of gene expression regulation through chromatin studies.

All GTN training data are now automatically mirrored via Onedata

As part of the EuroScienceGateway and in cooperation with Onedata and EGI we are providing all GTN training data on a publicly accessible cloud storage

Galaxy in Research: Investigating Food Safety Threats

Learn how Galaxy can be used to detect and analyze drug-resistant bacteria threatening food safety in Egypt.

EGI Check-in now available as login option in UseGalaxy.eu

EuroScienceGateway project enables EGI users in UseGalaxy.eu

Events

Jun 17 - Jun 21Workshop on high-throughput sequencing data analysis with Galaxy

This course introduces scientists to the data analysis platform Galaxy. The course is a beginner course; there is no requirement of any programming skills.

Jun 24 - Jun 292024 Galaxy Community Conference (GCC2024)

The annual gathering of the Galaxy Community with opportunities to hear latest developments, get training, and meet everyone involved.

Jun 25 - Jun 26Strategies for training and knowledge exchange with a consulting perspective

Join us at BioNT, for a 2-day workshop designed to enhance your training skills and explore training and knowledge-exchange roles in bioinformatics. Dive into the theory of learning, the development of training materials and the techniques for assessing training needs. Gain insights into effective training delivery, consulting-like approaches, and teaching technical knowledge. Don't miss this opportunity to elevate your training expertise! Registration deadline: 07.06.2024.

Jul 22 - Jul 26Workshop on high-throughput sequencing data analysis with Galaxy

This course introduces scientists to the data analysis platform Galaxy. The course is a beginner course; there is no requirement of any programming skills.

FTP Upload

For large files, FTP upload is also available on this server. Connect to port 23 with the same credentials you use to log into Galaxy. Once uploaded, open the Galaxy file upload menu, and click on the Choose FTP file button to import the files into your history.

As an example, a screenshot of the configuration settings for FileZilla can be found here.

Training

We regularly provide workshops.

But we cannot always meet capacity, so we've put all of our training materials online. This has become a community project with people from all over the world contributing training materials.

Topics include: variant analysis, transcriptomics, metagenomics, epigenetics, and many more!

Visit the Training Material View Publication

Galaxy training materials page

Our team

This Galaxy is maintained by the Bioinformatics group of the department of Pathology.

For any questions regarding this Galaxy server, please contact us.

Visit the team page