Galaxy Erasmus MC
The homepage of the Erasmus MC Galaxy community
Galaxy is an open-source platform for FAIR data analysis that enables users to:
- use tools from various domains (that can be plugged into workflows) through its graphical web interface.
- run code in interactive environments (RStudio, Jupyter...) along with other tools or workflows.
- manage data by sharing and publishing results, workflows, and visualizations.
- ensure reproducibility by capturing the necessary information to repeat and understand data analyses.
The Galaxy Community is actively involved in helping the ecosystem improve and sharing scientific discoveries.
News
Galaxy had a strong presence at Biological Data Science 2024, featured in talks and posters that showcased its power and versatility in advancing biological research.
Galaxy in Research: Transforming life in the tropics using genomic technologies for One Health
How can genomics improve health, food production, and biodiversity in tropical regions? A new review explores how cutting-edge technologies, including Galaxy, are shaping a sustainable future for the tropics.
Massive open online education party: The Galaxy Training Academy
In October 2024, the Galaxy Training Network (GTN) was running a global Galaxy online course
Galaxy Docker Image Update: Version 24.1 Released!
Discover Galaxy Docker 24.1 with updated services, streamlined architecture, and new features.
Events
Dec 6Single-cell and sPatial Omics | Collaboration Fest
The Single-cell and sPatial Omics Community of Practice (SPOC) are hosting their first Collaboration Fest, welcoming new and experienced contributors to our training materials.
Jan 10 - Jan 15Plant and Animal Genome Conference
Join us in San Diego to explore the latest in genomics, and don't miss the opportunity to attend a special workshop hosted by the Galaxy Project.
FTP Upload
For large files, FTP upload is also available on this server. Connect to port 23 with the same credentials you use to log into Galaxy. Once uploaded, open the Galaxy file upload menu, and click on the Choose FTP file button to import the files into your history.
As an example, a screenshot of the configuration settings for FileZilla can be found here.
Training
We regularly provide workshops.
But we cannot always meet capacity, so we've put all of our training materials online. This has become a community project with people from all over the world contributing training materials.
Topics include: variant analysis, transcriptomics, metagenomics, epigenetics, and many more!
Our team
This Galaxy is maintained by the Bioinformatics group of the department of Pathology.
For any questions regarding this Galaxy server, please contact us.