How to use Galaxy

How to cite Galaxy

Citing Galaxy

If you use Galaxy@Pasteur please cite doi:10.7490/f1000research.1114334.1

Cluster Load

test

For pasteur users:

  • Instructions on how to import big data here.
  • Galaxy Initiation slides are available here.
  • If you need a new tool or a new genome index for an existing tool (bwa, blast, star...), send an email to Pasteur_galaxy_support.

Warning! When xml are updated, workflows using them must be adapted.

News

Tabula Sapiens and Tabula Muris Senis Atlases Now Available in Galaxy

Comprehensive Single-Cell Reference Atlases Ready for Import

New Publication "Flexynesis: A deep learning toolkit for bulk multi-omics data integration for precision oncology and beyond"

Flexynesis: bridging multi-omics complexity with transparent AI for Cancer research and beyond

European Galaxy Days 2025: Many communities, one buzzing week in Freiburg

1–3 Oct 2025, Freiburg: European Galaxy Days, ELIXIR Galaxy, and EuroScienceGateway members convened to align roadmaps and turn plans into solutions, tools, and workflows through talks, demos, and a CoFest.

BRC-analytics is open for business!

From data to publication in a browser with BRC-Analytics: Evolutionary dynamics of coding overlaps in measles virus

New Publication "Galaxy single-cell & spatial omics community update: Navigating new frontiers in 2025"

The Galaxy single-cell and spatial omics community (SPOC) is thrilled to share the latest updates on tools, datasets, and collaborative initiatives driving open and reproducible single-cell and spatial omics research in 2025.

Events

Oct 14 - Oct 18ASHG 2025 Annual Meeting

Join the ASHG Annual Meeting in Boston to explore advances in human genetics and genomics.

Oct 28 - Oct 30Science Gateways 2025

Join Science Gateways 2025 to explore portal technologies accelerating scientific discovery.

Nov 5 - Nov 8Genome Informatics

Join the CSHL Genome Informatics conference (#gi2025) on computational genomics.