Data issues

Master Genomes Additions ticket with all tracked issues/enhancements:

List of most important active issues below

All issues related to the servers and

  1. rn6 and danRer10 missing len data.
  2. Related ^^^ Add latestest UCSC genomes to builds.txt plus .len data to
  3. papHam1 is reporting just "papHam" as the dbkey with (at least) Bowtie2: Needs review/ticket.
  4. LiftOver DM request.
  5. Update SICER to include more genome builds (ideally all on the instance).
  6. rheMac3 has 2 copies of the index files listed in the data table, but at different directories.


  1. Track promotion of Kraken reference data to