Variant detection using Galaxy
by QFAB, University of Queensland
- Date: March 2nd 2017
- Location: QFAB, The University of Queensland, St Lucia. Australia
- Event URL: http://www.qfab.org/workshops/variant-detection-using-galaxy-02-mar-2017
- Contact: organizers
This workshop will cover the concepts of detection small variants, including SNPs and small indels, from next-generation sequencing data. You will use and compare a number of popular variant detection tools, visualise variants using a genome browser, and annotate SNPs for predicted biological effects.
The workshop will all be based in Galaxy, a platform that provides a simple and user-friendly interface to bioinformatics tools.