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BOSC 2012   ISMB 2012

Galaxy at ISMB and BOSC 2012

Galaxy had a significant presence at ISMB and BOSC 2012. This page lists known Galaxy related events and presentations.

Date Event Time Title & Presenter Links
Wednesday July 11 OpenBio Codefest 2012 All Day Enis Afgan and Dannon Baker of the the Galaxy Team will participate. Report
Thursday July 12
Friday July 13 BOSC 11:35-12:00 MGTAXA - a toolkit and a Web server for predicting taxonomy of the metagenomic sequences with Galaxy front-end and parallel computational back-end, Andrey Tovchigrechko, JCVI slides
Saturday July 14 10:45-11:00 GenomeSpace: An open source environment for frictionless bioinformatics, Michael Reich, Broad Institute slides
11:00-11:15 Galaxy Project Update, Dannon Baker, Emory University slides
11:15-11:30 Zero to a Bioinformatics Analysis Platform in 4 Minutes, Enis Afgan, Ruđer Bošković Institute (RBI) and Victorian Life Science Computation Initiative (VLSCI) slides
2:40-2:55 A Framework for Interactive Visual Analysis of NGS Data using Galaxy, Jeremy Goecks, Emory University slides
Sunday July 15 ISMB 2012 12:15-12:40 TT06 - The Taverna Server: Executing Scientific Workflows Remotely, Katy Wolstencroft, University of Manchester
2:30-2:55 TT08: Interactive Visual Analysis of NGS Data using Trackster and Galaxy, Jeremy Goecks, Emory University Slides
3:00-3:25 TT10: The first biomedical AppStore: Galaxy Tool Shed, Greg von Kuster, Penn State University Slides
Monday July 16 10:45-11:10 TT15 - GenomeSpace: An environment for frictionless bioinformatics, Michael Reich, Broad Institute
11:45-12:10 WK3 - Part C: Running a Bioinformatics Help Desk: from drawing colorful plasmid maps to working with Hi Seq Data, Hans-Rudolf Hotz, Friedrich Miescher Institute Slides
12:40-2:30 Poster A33: A large-scale microbial whole genome sequencing pipeline for outbreak investigation, Natalie Knox, Public Health Agency of Canada
Poster AA07: GenomeSpace: An environment for frictionless bioinformatics, Michael Reich, Broad Institute poster
Poster E09: LIMS and Bioinformatics Support for the GLBRC Seed-to-Biofuels Research Pipeline, Yury Bukhman, Great Lakes Bioenergy Research Center poster
Poster G19: RNA-Seq Analysis of Eucalyptus Genotypes that Differ in Carbon Allocation, Adhemar Zerlotini, EMBRAPA
Poster K01: BiocaNet: Central American Bioinformatics Network, Allan Orozco Central American Bioinformatics Institutional Network (BiocaNET)
Poster S07: BE Seeker 2: Enhanced algorithm for analysis of large scale BS and RRBS data, Petko Fiziev University of California, Los Angeles
Poster U17: Bioinformatics Tools and Analysis for RAD Tag Analysis of Incipient Speciation, Lauren Assour University of Notre Dame
Tuesday July 17 12:40-2:30 Poster A50: Enabling the reuse of methods while unraveling the epigenetic factors of Huntington's Disease, Marco Roos, Netherlands Bioinformatics Centre
Poster E12: Managing complex bioinformatics pipelines through PyPedia and MOLGENIS, Marcel Kempenaar, University Medical Center Groningen
Poster U28: Data Intensive Academic Grid (DIAG): A Computational Cloud Infrastructure Designed for Bioinformatics Analysis, Anup Mahurkar Institute for Genome Sciences
Poster U36: Nebula - a web-server for advanced ChIP-Seq data analysis, Valentina Boeva, Institut Curie poster
Poster U52: Lessons learned from RNA-Seq Read Alignment Evaluations, Andre Kahles, Memorial Sloan-Kettering Cancer Center