Contributors (43)
News (89)
Integration of the Hugging Face Hub with Galaxy
Galaxy users can now browse the Hugging Face Hub as a repository source, import models straight into their histories, and feed them into tools. A step-by-step example shows how to pull models from the Hugging Face Hub into Galaxy and then using the existing DocLayout-YOLO tool for document layout segmentation.
Galaxy Tool Wrapping: Introducing the New Tool Developers SIG
Join the newly formed Tool Developers Special Interest Group (SIG) to collaborate on high-quality tool maintenance and standardize best practices across the Galaxy ecosystem. This initiative offers a dedicated space for mentorship, peer review, and community-driven development for developers of all experience levels.
One framework, one workflow, many communities: Freiburg Galaxy team at EOSC Symposium 2025
Galaxy showed how 'one framework, one workflow, many communities' can run cross-disciplinary imaging analyses on the emerging EOSC Federation. Here is what we presented, with slides and video.
European Galaxy Days 2025 recordings now online
European Galaxy Days 2025 might be over, but the talks aren’t. Explore our new playlist featuring highlights from EGD2025
From Functional Nucleic Acids to Galaxy Training: Reflections on My Research Stay in Freiburg
Collaboration and innovation with the Galaxy Europe team
Tabula Sapiens and Tabula Muris Senis Atlases Now Available in Galaxy
Comprehensive Single-Cell Reference Atlases Ready for Import
European Galaxy Days 2025: Many communities, one buzzing week in Freiburg
1–3 Oct 2025, Freiburg: European Galaxy Days, ELIXIR Galaxy, and EuroScienceGateway members convened to align roadmaps and turn plans into solutions, tools, and workflows through talks, demos, and a CoFest.
Microbial Genes Recovery in Galaxy
A new Galaxy workflow enables researchers to recover and analyze microbial genes from metagenomic data.
Group Assignment for Co-Assembly in Galaxy
A new Galaxy workflow supports group-based co-assembly, helping researchers recover more high-quality MAGs by organizing samples with metadata.
Freiburg Galaxy Team at CE-IUSSI Meeting 2025 in Szeged
At CE-IUSSI 2025 in Szeged, the Freiburg Galaxy Team showcased how the FAIRyMAGs workflow enables FAIR, accessible insect microbiome research using Galaxy.
Exploring Genomics with Galaxy: A Six-Week Internship Journey
My internship experience with assembling genomes and annotating them during a 6 week internship
Freiburg Galaxy Team’s Internal Tool Development Workshop
Know more about the recent Tool Development workshop organized at Freiburg Galaxy Team
🔬 QuPath-Galaxy: Bringing digital pathology image analysis to your browser.
Explore whole slide images and run powerful tissue analysis directly in your browser with the QuPath-Galaxy interactive tool.
RSpace is now integrated with Galaxy
Analyze data with Galaxy, keep it under control on RSpace
Freiburg Galaxy team at the EGI 2025
From June 03rd to 6th, members from the Freiburg Galaxy team travelled to Santander, Spain to participate and present the EuroScienceGateway (ESG) project at the EGI2025 meeting
Galaxy Team at the 9th Women’s Careers and Networks Symposium
Galaxy Europe took part in the WoCaNet 2025 symposium to support women in science and introduce researchers to accessible, reproducible data analysis.
The Galaxy Europe team at the ELIXIR All Hands Meeting 2025
The Galaxy Europe team has participated in the ELIXIR All Hands meeting 2025 in Thessaloniki, Greece.
Training Infrastructure as a service (TIaaS) Feedback from Dr. Janne M. Toivonen
Thanks to TIaaS, our RNA-Seq workshops run smoothly—no more delays, just effective hands-on learning.
Vizgen Postprocessing Tool (VPT) now available in Galaxy
Reprocess and refine the single-cell results of MERSCOPE experiments
Training Infrastructure Feedback from the MSc Program „Translational Medical Research“ (TMR), Medical Faculty of Mannheim, University of Heidelberg; WS 2024/25
From sequencing to R scripting—TIaaS helped us turn RNA-Seq into a hands-on learning success for future medical researchers.
Events (16)
DOMPS SYMPOSIUM 2026
The use of AI in biological research
NFDI4BIOIMAGE All-Hands Meeting 2025
Galaxy Resources for Educators & Trainers
Part of the Galaxy Resources Webinar Series
Speed up your data analysis with Galaxy: Features no one knows about
Galaxy bridge to Jupyter notebooks and RStudio
Jupyter Notebooks and RStudio in combination with Galaxy workflows
Processing thousands of datasets simultaneously
Processing thousands of datasets simultaneously
Galaxy collections and advanced collections features
Advanced Galaxy workflow features
From parameter sweeping to automatic reports
DRS, long-read-sequencing, proteomics and more - An update to recent COVID-19 workflow developments
Viral Beacon and Galaxy variant workflows
Insights from selection analysis of complete genomes and read-level data
Supporting the COVID-19 Data portal: viral data cleaning from human reads and submission to ENA
Importance of (open) infrastructures in responding to a pandemic
Galaxy-ELIXIR Webinar/Workshop: Machine Learning using Galaxy
Register by 16 June